Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00754 ATGGTAGCTCTGGCAGTTCTCCTCGCCGCCGCCGTTCTCGTCTCCGGCACGGTGCCTCTACACAAATCTCAGCTGGAAGCATGGTTCCACCAGAAAGTGAAGCCGTGTACAGAGCGGAAAGGCATCATTGACCATGCATTGCTCATTGCAGAACTTAACAAGAGAGTTATCAAGGTGATGAAAGATGGCAGTGGCGATTGCAAGACCATATCAGATGCCATCAAGATGATCCCAGCCGGGAACACCAAGCGTGTGATTGTACACATTGGGCCAGGAGTTTACGACGAGCAAGTCAGAATTGAAAAGACCAAACCTTTTGTTACCTTATTTGGCTTACCTTCAAGCATGCCAAACTTGACCTATTCTGGTGGTGCTACCGTGGTTGTTGAATCAGAGTACTTCATGGCttcaaatatcattttttcgAATACGCCGCTGGAATCGAGTGGGAATAAGATTGATTGGAAGAGTAATGATCTTAAGAGCAAAGGAGAAGATGCTTCGTCACAGGCACAAAAGAATTCATCGCCGAAATCGAGTGGGAATAAGATTGATTGGAAGAGGAATGATCTTAAGAGCAAAGGAGAAGATGCATCGTGGCATGCACAAAAGAATTCATCGTCGAAGCCGAGTGAGAAGAAGAGCAAAGGAGCACATGCACAGACACAGGCACAAACAGAGACACAGAAACAGACTCAAACACAGACTCAGGCCCAGACTCAGACACAGACGCAAATACAGAAACAAACTCAAACTCAGACTCAGACAGAGACACAAGCACAGGCACAAACACAGACACAGGCTTTGAAGATTTCTGGGGACAAAGCTGCATTCTATAGTTGTAAATTTATGGGAATCAGGGACACCTTACACGACGAGCAGGGCAGACATCTTTTCAAAGACTGTACAATTCAGGGGGCCTTAGACTTCATCTATGGAAGTGCAAAGTCTCTATATTTGAACTCCAAGGTGCATGTGCTTGCAGACAATGGGTTAACATCTATAGTAGCACCCGATAGAAGTAGCAAGTCAAAAGATACTGGGTTCGTGTTTGTCCACTGTGATGTAACTGGGACTAACAGTGAGACTTACTTGGGCAGAGCAGGGTCCACACATCCTCAAGCAATCTATGCTTACTCAAACATAGGCGTTATTAACCCTGCTGGTTGGTTTAACAAACTTCACCCTCATCAGGGTGCTGGGACAAATACAGAGTTCTTAGAGTACATGAACCAGGGGCCAGGTGCGAAGACCAGTAAAAGTGACAAGTTCTCAAAATCCCTAAGTGCTTCAGAGGCTCAATCTTTCATCTCCCTTTCCTATATTCAGGCTTCCACATGGCTGCTTCCGGCTCCATA 1358 0.4551 MVALAVLLAAAVLVSGTVPLHKSQLEAWFHQKVKPCTERKGIIDHALLIAELNKRVIKVMKDGSGDCKTISDAIKMIPAGNTKRVIVHIGPGVYDEQVRIEKTKPFVTLFGLPSSMPNLTYSGGATVVVESEYFMASNIIFSNTPLESSGNKIDWKSNDLKSKGEDASSQAQKNSSPKSSGNKIDWKRNDLKSKGEDASWHAQKNSSSKPSEKKSKGAHAQTQAQTETQKQTQTQTQAQTQTQTQIQKQTQTQTQTETQAQAQTQTQALKISGDKAAFYSCKFMGIRDTLHDEQGRHLFKDCTIQGALDFIYGSAKSLYLNSKVHVLADNGLTSIVAPDRSSKSKDTGFVFVHCDVTGTNSETYLGRAGSTHPQAIYAYSNIGVINPAGWFNKLHPHQGAGTNTEFLEYMNQGPGAKTSKSDKFSKSLSASEAQSFISLSYIQASTWLLPAP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00754 452 MobiDBLite consensus disorder prediction 183 199 - -
Bva12g00754 452 Gene3D - 55 451 IPR012334 -
Bva12g00754 452 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 167 - -
Bva12g00754 452 PANTHER PECTINESTERASE 63-RELATED 256 449 - -
Bva12g00754 452 Pfam Pectinesterase 234 444 IPR000070 GO:0030599|GO:0042545
Bva12g00754 452 Pfam Pectinesterase 57 144 IPR000070 GO:0030599|GO:0042545
Bva12g00754 452 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 256 449 - -
Bva12g00754 452 SUPERFAMILY Pectin lyase-like 55 450 IPR011050 -
Bva12g00754 452 MobiDBLite consensus disorder prediction 164 182 - -
Bva12g00754 452 MobiDBLite consensus disorder prediction 148 230 - -
Bva12g00754 452 PANTHER PECTINESTERASE 63-RELATED 22 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00754 Bva-Chr12 8962769 8973152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00754 262 452 Carbohydrate Esterase AT5G07430 44.271 6.23e-55 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00754 K01051 - fve:101294998 205.297