Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00753 ATGGTAGCTCTGGCAGTTCTCCTAGCTGCCGCCGTTCTCGTCTCCGGCACGGTGCCTCTACACAAATCTCAGCTGGAAGCATGGTTCCACCAGAAAGTGAAGCCGTGTACAGAGCGGAAAGGCACCATTGACCATGCATTGCTAATTGCAGAACTTAACAAGAGAGTTATCAAGGTGATGAAAGATGGCAGTGGCGATTGCAAGACCATATCAGATGCCATCAAGATGATCCCAGCAGGGAACACCAAGCGTGTGATTGTACACATTGGGCCAGGAGTTTACAACGAGCAAGTCAGAATTGAAAAGACCAAACCTTTTGTTACCTTATTTGGCTTACCTTCAAGCATGCCAAACTTGACCTATTCTGGTGGTGCTACCGTGGTTGTTGAATCAGAGTACTTCGTGGCttcaaatatcattttttcgAATATACCGCTGGAATCGAGTGGGAATAAGATTGATTGGAAGAGGAATGATATTAAGAGCAAAGGAGAAGATGCATCGTCACAGGCACAAAAGAATTCATCGCCTAAATCAAGTGGGAATAAGATTGATTGGGAGAGGAATGATCTTAAGAGCAAAGGAGAAGATGCATCGTGGCATGCACAAAAGAATTCATCGTCGAAGCCGAGTGAGAAGAAGAGCAAAGGAGCACATGCACAGACACAGGCACAAACACAGACACAAAAACACACTCAAACTCAGACTCAGACACAGACACAAATACAGAAACAAACTCAAACTCATACTCAGACTCAGACACAGACACAAGCACAGGCACAAACACAGACACAGGCTTTGAAGATTTCTGGGGACAAAGCTGCATTCTATAGTTGTAAATTTATGGGAATCAAGGACACCTTACACGACGAGCAGGGCAGACATTTTTTCAAAGACTGTACAATTCAGGGGGCCTTAGACTTCATCTATGGAAGTGCAAAGTCTCTATATTTgAACTCCAAGGTGCATGTGCTTGCAGACAATGGGTTAACATCTATAGTAGCACCCGATAGAAGTAGCAAGTCAAAAGATACTGGGTTCGTGTTTGTCCACTGTGATGTAACTGGTACTAACAGTAAGACTTACTTGGGCAGAGCATGGTCCAAACATCCTCAAGCAATCTATGCTTACTCAAGCATAGGCGTTATTAACCCTGCTGGTTGGTTTAAGAAACTTCACCCTCATCAGGGTGCTGGGACAAATACAGAGTTCTTAGAGTACATGAACCAGGGGCCAGGTGCGAAGACCAGTAAAAGTGACAAGTTCTCAAAAACCCTAAGTGCTTCAGAGGCTCAATCTTTCATCTCCCTTGCCTATATTCAGGCTTCCACATGGCTGCTTCCGGCTCCATA 1352 0.443 MVALAVLLAAAVLVSGTVPLHKSQLEAWFHQKVKPCTERKGTIDHALLIAELNKRVIKVMKDGSGDCKTISDAIKMIPAGNTKRVIVHIGPGVYNEQVRIEKTKPFVTLFGLPSSMPNLTYSGGATVVVESEYFVASNIIFSNIPLESSGNKIDWKRNDIKSKGEDASSQAQKNSSPKSSGNKIDWERNDLKSKGEDASWHAQKNSSSKPSEKKSKGAHAQTQAQTQTQKHTQTQTQTQTQIQKQTQTHTQTQTQTQAQAQTQTQALKISGDKAAFYSCKFMGIKDTLHDEQGRHFFKDCTIQGALDFIYGSAKSLYLNSKVHVLADNGLTSIVAPDRSSKSKDTGFVFVHCDVTGTNSKTYLGRAWSKHPQAIYAYSSIGVINPAGWFKKLHPHQGAGTNTEFLEYMNQGPGAKTSKSDKFSKTLSASEAQSFISLAYIQASTWLLPAP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00753 450 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 168 - -
Bva12g00753 450 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 254 447 - -
Bva12g00753 450 MobiDBLite consensus disorder prediction 217 233 - -
Bva12g00753 450 MobiDBLite consensus disorder prediction 183 199 - -
Bva12g00753 450 PANTHER PECTINESTERASE 63-RELATED 254 447 - -
Bva12g00753 450 PANTHER PECTINESTERASE 63-RELATED 22 168 - -
Bva12g00753 450 Pfam Pectinesterase 57 144 IPR000070 GO:0030599|GO:0042545
Bva12g00753 450 Pfam Pectinesterase 229 442 IPR000070 GO:0030599|GO:0042545
Bva12g00753 450 SUPERFAMILY Pectin lyase-like 55 448 IPR011050 -
Bva12g00753 450 Gene3D - 51 449 IPR012334 -
Bva12g00753 450 MobiDBLite consensus disorder prediction 167 182 - -
Bva12g00753 450 MobiDBLite consensus disorder prediction 162 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00753 Bva-Chr12 8956646 8969916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00753 260 450 Carbohydrate Esterase AT5G07430 45.312 9.15e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00753 K01051 - gmx:100786427 203.756