Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00752 ATGGTAGCTCTGGCAGTTCTCCTCGCCGCCGCCGTTCTCGTCTCCGGCACGGTGCCTCTACACAAATCTCAGCTGGAAGCATGGTTCCACCAGAAAGTGAAGCCGTGTACAGAGCGGAAAGGCATCATTGACCATGCATTGCTCATTGCAGAACTTAACAAGAGAGTTATCAAGGTGATGAAAGATGGCAGTGGCGATTGCAAGACCATATCAGATGCCATAAAGATGATCCCAGCAGGGAACACCAAGCGTGTGATTGTACACATTGGGCCAGGAGTTTACAACGAGCAAGTCAGAATTGAAAAGACCAAACCTTTTGTTACCTTATTTGGCTTACCTTCAAGCATGCCAAACTTGACCTATACTGGTGGTGCTACCGTGGTTGTTGAATCAGAGTACTTCGTGGCttcaaatatcattttttcgAATTTATCGCCAAAGCCGAGTGGGAATAACATTGATTGGAAGAGGAATGATCTTCCGAGCAAAGGAGCACATGCATCGTCGCAAACACAAACACGGAGACGGGCACAAACACAGACACAGGCTATGAAGATTTCTGGGGACAAAGCTGCATTTTATAGTTGTAAATTTACGGGAATCAAGGACACCTTAAACGACGAGCAGGGCAGACATTTTTTCAAAGACTGTACAATTCAGGGCGCCTTAGACTTCATATATGGAAGTGCAAAGTCTCTATATTTGAACTCCAAGGTGCATGTGCTTGCAGACAATGGGTTAACATCTATAGTAGCACCCGATAGAAGTAGCAAGTCAAAAGATACTGGGTTCGTGTTTGTGCACTGTGATGTAACTGGGACTAACAGTAAGACTTACTTGGGCAGAGCATGGACCACACATCCTCAAGCAATTTATGCTTACTCAAGCATAGGCGTCATTAACCCTGCTGGTTGGTTTAACAATCTTCACCCTCATCAGGGTGCTGGGACAAATACAGAGTTCTTAGAGTACATGAACCAGGGGCCAGGTGCGAAGACCAGTAAACGTGACAAGTTCTCAAAAACCCTAAGTGCTTCAGAGGCTCAATCTTTCATCTCCCTTAGCTATATTCAGGCTTCCACATGGCTGCTTCCGGCTCCATA 1103 0.4533 MVALAVLLAAAVLVSGTVPLHKSQLEAWFHQKVKPCTERKGIIDHALLIAELNKRVIKVMKDGSGDCKTISDAIKMIPAGNTKRVIVHIGPGVYNEQVRIEKTKPFVTLFGLPSSMPNLTYTGGATVVVESEYFVASNIIFSNLSPKPSGNNIDWKRNDLPSKGAHASSQTQTRRRAQTQTQAMKISGDKAAFYSCKFTGIKDTLNDEQGRHFFKDCTIQGALDFIYGSAKSLYLNSKVHVLADNGLTSIVAPDRSSKSKDTGFVFVHCDVTGTNSKTYLGRAWTTHPQAIYAYSSIGVINPAGWFNNLHPHQGAGTNTEFLEYMNQGPGAKTSKRDKFSKTLSASEAQSFISLSYIQASTWLLPAP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00752 367 MobiDBLite consensus disorder prediction 163 177 - -
Bva12g00752 367 MobiDBLite consensus disorder prediction 152 177 - -
Bva12g00752 367 Gene3D - 51 366 IPR012334 -
Bva12g00752 367 PANTHER PECTINESTERASE 63-RELATED 22 364 - -
Bva12g00752 367 Pfam Pectinesterase 57 144 IPR000070 GO:0030599|GO:0042545
Bva12g00752 367 Pfam Pectinesterase 177 359 IPR000070 GO:0030599|GO:0042545
Bva12g00752 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 364 - -
Bva12g00752 367 SUPERFAMILY Pectin lyase-like 54 364 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00752 Bva-Chr12 8954290 8959946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00752 1 367 Carbohydrate Esterase AT5G07430 40.263 6.15e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00752 K01051 - gmx:100816036 350.517