Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00747 ATGAAACCCGTAtttgtgttttcctttttcttcctctcttttgCTTCAATTCTTCTCCTTGCTGAATCCAAATGCAGCAAGGGTTGCGATTTGGCTCTAGCTTCGTATTATGTCTTGGCTGGTTCCAATCTCACTTACATTGCTGATATTTTGAAATCCGAGAAAGTTTCAAGTCCTGACGACATAGTCAGCTACAATAAAGACAAAATCCCCAACCAAGACAGCGTTCAATCCTTTATTAGAGTGAATGTTCCTTTCCCTTGTGATTGTATTAATGGTGAATATCTGGGACATAATTTTCAGTATGATGTTAACACAGGCGACACCTATGAGACGATTGCAAAGACCAACTTTGCCAATCTGACCACTGTTGATTGGTTACAGAACTTCAATAGCTATCGACCAAACAACATTCCTGATACTGGAACCCTTAATGTGACGATTAATTGTTCATGTGGGGATAGTGAAGTTTCGAAAGATTATGGGTTGTTCATCACATACCCACTTAGACCTGGGGAGACTCTGCAGTCAGTTGCAAATAGTGTGAGTCTTGATGCGGGGTTGTTGCAGAGGTACAACCCCAGTGTGAATTTTAACCAAGGAAGTGGTCTGGTTTATATTCCTGGAAAAGATCAAAATGGTACCTACGTGGCCCTGAGTTCCAGTTCAGGAGGAGCAGGTATAGCTGGGGGAGCTATTGCTGGAATCTCTGTTGGAGTAATAGCTGGACTTCTGCTATTGGCTGTCTGTGTATATGTTGGATATTTCCGAAAGAAGGTTCAGGGGGTGAAGTTACTCTCTCAAGATTCCAAAGTGCTTTCTGTTCAAAATAGGAGTGATGAAACGTCTGCTGAATATAAAACTTCAGAATCTGGCGCTCCTGCTGGTGGCGGTGGTGCTGTTATCACGGGAATCACAGTGGACAAATCAGTTGAGTTCTCATACGAAGAACTAGCCAATGCCACGAATAATTTCAGTTTGGCTAACAAAATTGGTCAGGGAGGTTTCGGTGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCCATTAAGAAGATGGATATGCAAGCATCACGAGAATTTCTTGCTGAATTGAAAGTCTTGACCCATGTTCATCACGTTAACCTGGTGCGCCTGATTGGATATTGCGTCGAGggctctcttttccttgtctaTGAATACATTGAGAATGGAAACTTAAGCCAGCATTTGCGTGGTTCAGGAAAAGACCCCTTGCCATGGACTTGCCGGATGCAAATTGCTCTGGATTCAGCCAGAGGTCTCGAATATATTCACGAGCATACAGTGCCGGTCTATATCCACCGTGACATAAAGTCTgcaaatatattaatagaCAAAAACTTCCATGGAAAGGTTGCAGATTTTGGATTGACCAAACTGACTGAAGTCGGAAGCTCATCCCTTCCCACTGGCCGTCTTGTGGGAACATTTGGATACATGCCGCCAGAATATGCTCAATATGGCGATGTTTCTCCCAAGGTAGATGTCTACGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAAGAAGCTATTATCAAGATAAATGACAATGTTGCTGATTCAAAAGGGCTTGTAGCTTTGTTTGGAGGAGTTCTTAACCAGCCAGATCCCACAGAAGATCTTCGCAAACTAGTGGATCCAAGGCTTGGCGATAACTACCCTATTGATTCAGTCCGCAAGATGGCGCAACTGGCAAGAGCGTGTACACAAGACAACCCACAACTACGCCCAAGCATGAGATCTATTGTGGTTGCTCTTATGACACTTTCTTCCAATACTGAAGATTGGGATGTTGGTTCCttctatgaaaataaagatcTTGTGAATCTTATGTCTGGAAGATA 1874 0.4157 MKPVFVFSFFFLSFASILLLAESKCSKGCDLALASYYVLAGSNLTYIADILKSEKVSSPDDIVSYNKDKIPNQDSVQSFIRVNVPFPCDCINGEYLGHNFQYDVNTGDTYETIAKTNFANLTTVDWLQNFNSYRPNNIPDTGTLNVTINCSCGDSEVSKDYGLFITYPLRPGETLQSVANSVSLDAGLLQRYNPSVNFNQGSGLVYIPGKDQNGTYVALSSSSGGAGIAGGAIAGISVGVIAGLLLLAVCVYVGYFRKKVQGVKLLSQDSKVLSVQNRSDETSAEYKTSESGAPAGGGGAVITGITVDKSVEFSYEELANATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASREFLAELKVLTHVHHVNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGKDPLPWTCRMQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIIKINDNVADSKGLVALFGGVLNQPDPTEDLRKLVDPRLGDNYPIDSVRKMAQLARACTQDNPQLRPSMRSIVVALMTLSSNTEDWDVGSFYENKDLVNLMSGR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00747 624 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Bva12g00747 624 Pfam Protein tyrosine and serine/threonine kinase 327 595 IPR001245 GO:0004672|GO:0006468
Bva12g00747 624 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00747 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 624 IPR044812 GO:0019199|GO:0045087
Bva12g00747 624 Gene3D Transferase(Phosphotransferase) domain 1 396 615 - -
Bva12g00747 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 5 624 - -
Bva12g00747 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Bva12g00747 624 CDD STKc_IRAK 331 593 - -
Bva12g00747 624 ProSiteProfiles Protein kinase domain profile. 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00747 624 Gene3D Phosphorylase Kinase; domain 1 310 395 - -
Bva12g00747 624 SUPERFAMILY Protein kinase-like (PK-like) 306 596 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00747 Bva-Chr12 8883112 8888577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00747 4 624 Receptor kinase-like Gene Family AT3G21630 59.968 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g00747 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00747 - K13429 gmx:100777781 905.975