Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00746 ATGGCAGGTCTAGCTGGTGGAGCTATTGCTGGAATCTCTGTTGGAATAATAGCCGGGCTTCTGCTATTGGCAGTCTGTGTATATATTTGCTATCTCCGAAAGAACGAGGTTGAAGATTCCAAAGTGCTCTCTGATCATAGTGGGAGTGGATCTGGTGTTTCTGCTGTTGATGGTGGTGCTATCATCACAGGAATCACAGTGGACAAATCGATTGAGTTCTCATATGAAGAACTAGCCAATGCCACAAATCACTTCAGTTTGGCTAACAAAATTGGTCAAGGAGGTTTCGGTGCTGTCTACTATGCAGAGCTGAGAGGCGCGAAAGCTGCCATTAAGAAGATGGATAAGGAAGCATCGCGAGAATTTCTTGCTGAACTGAAAGTATTGACTCATGTTCATCACCCTAACGTGGTGCGCTTGATTGGATATTGTGTCGAGGGCTCACTTTTCCTTGTCTATGAATACATTGACAACGGAAACTTGAGGGAACATCTGCGTGATTCAGGAAGAGATCCCTTGCCATGGTCTTTGCGGGTGCAAATTGCTTTGGATTCAGCCAGATGCCTTGAGTATATTCACGAGCTTACAGTGCCTGGCTATATCCACCGTGACATAAAGTCTGCAAATATATTGATAGACAAAAACTTCCATGGAAAGGTTGCAGGTTTTGCATTGTCCAAACTGACTGAAGTTGGAAGCTCATCCCTTTCCACTGGCCGTCTTGTGGGAACATTTGGATATATGTCACCAGAATATGCTCAATATGGCAATATTTCTCCCAAGATAGATGTCTATGCTTTTGGAGTAGTTTTTTATGAACTTATTTCTGCTAAAGAAGCTATTATCAAGATGGATGAATCTGTTGCTGAATCAAAGTCCCTTGTAGCTTTGTTTGAAGGAGTTCTTAATCAGCCTAATCCTACAGAAGATCTTCGCAAAATAGTGGATCCAAGGCTTGGTGATAATTACCCTGTTGATTCAGTTTGCAAGATGGCTCAACTGGCGAGAGCGTGTATACAAAACAACCCAGAACTGCGCCCAAGTATGAGATCTATTGTGGCTGCTCTTAGGACACTATCTTCCAATACTGAAGATTG 1097 0.4294 MAGLAGGAIAGISVGIIAGLLLLAVCVYICYLRKNEVEDSKVLSDHSGSGSGVSAVDGGAIITGITVDKSIEFSYEELANATNHFSLANKIGQGGFGAVYYAELRGAKAAIKKMDKEASREFLAELKVLTHVHHPNVVRLIGYCVEGSLFLVYEYIDNGNLREHLRDSGRDPLPWSLRVQIALDSARCLEYIHELTVPGYIHRDIKSANILIDKNFHGKVAGFALSKLTEVGSSSLSTGRLVGTFGYMSPEYAQYGNISPKIDVYAFGVVFYELISAKEAIIKMDESVAESKSLVALFEGVLNQPNPTEDLRKIVDPRLGDNYPVDSVCKMAQLARACIQNNPELRPSMRSIVAALRTLSSNTED 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00746 365 SMART serkin_6 85 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00746 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bva12g00746 365 Gene3D Phosphorylase Kinase; domain 1 71 155 - -
Bva12g00746 365 SUPERFAMILY Protein kinase-like (PK-like) 67 356 IPR011009 -
Bva12g00746 365 Gene3D Transferase(Phosphotransferase) domain 1 156 365 - -
Bva12g00746 365 ProSiteProfiles Protein kinase domain profile. 85 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00746 365 PIRSF ILK 40 365 - -
Bva12g00746 365 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 3 365 - -
Bva12g00746 365 Pfam Protein tyrosine and serine/threonine kinase 87 356 IPR001245 GO:0004672|GO:0006468
Bva12g00746 365 ProSitePatterns Protein kinases ATP-binding region signature. 91 113 IPR017441 GO:0005524
Bva12g00746 365 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 365 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00746 Bva-Chr12 8875709 8878778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00746 3 363 Receptor kinase-like Gene Family AT3G21630 62.903 8.50e-155 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g00746 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00746 - K13429 vvi:100255092 514.612