Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00745 ATGGCATCCGATGTTCTTACCAAGGCAGAAGATATTGTCAGCTACAACGCTGACAAAATACCCAACAAAGACATTCTCCCTTCCACCATAAGAATCGATGTTCCATTCCCTTGCGAATGCATCGAAGACGAATTTTTGGGTCACACTTTTCAGTACTCACTCAGTTCTGAGGAAACCTATACAACAATTGCTCAAGGGAACTTTTCCAATTTGACCACTGATGTTTGGATTCAGAGATTCAACAGATTCTCTGAGACCGAGCTGCCAGATTCTGGGACAATTAATGTTACTATTAATTGTTCGTGCGGGAAAAGAGAGGTTTCCAATGATTATGGGTTGTTCGTAACATACCCACTTAGAGAGGAAGATTCCTTGGAGTCTATAGCCAATGAGACGAAGCTTGATGCTGCTTTACTCCAGCAGTACAATCCTGGCGTGAATTTTAGCCAAGGGAGTGGTCTTGTTTTTATTCCAGGGAAAGACCAAAATGATAGCTATGTGCCACTGCCACCGCCAAGTGCAGAAGGTCTAGATGGTGGGACGGTAGCAGGAATATCGGTTGGAGTAGCTGcgcttctcttttttgtggTTTGTATATTTGTGGGATATTActggagaaagaagagaggatATGGAGAAATGCTCTCCGCTCAAGATATGAAAGATACAACCACTGGCAATGTTGAATATGAAACTTTTGGTTCTGGTGGTCCTGGTGGTGCTACTGGCATCACAAGCATTATGGTGGACAAATCAGTGGAATTCTCGTATGAAGAACTAGCCAATGCCACAGATAACTTCAGTGTAGCTAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTCTACTATGGAGAGCTGAGAGGAGAGAAAGTTGCAATTAAGAAGATGGAAATGAAAGCATCTAAAGAGTTTATTGCTGAAGTGAAAGTCTTGATGAATGTTCATCACTTGAACCTGGTGCGGTTGATTGGATTTTGTGTTGAAGGCTCTCTTTTTGTTGTCTACGAGTTTATTGACAATGGGAATTTAAGCCAACATCTACGCAGTTCAGGGAAAGAACCTATGCCATGGTCTATCCGAGTGCAGATTGCTCTGGATTCAGCTAGAGGTCTTGAATATATTCACGAGCATACGCatcctatatatattcatCGTGACATAAAGTCAGCCAATATTTTAATAGACAGAAACTTCCGCGGAAAGGTTGCAGATTTTGGATTAGCAAAGTTGACAGAGGGAAGTTCAACGATTATGACCAATCAACCTGTGGGAACATTTGGATACATGCCTGCAGAATATCTTCAATTTGGGGATGTTTCTTCTAAAGTAGATGTCTATGCTTTTGGAGTTGTTCTATATGAACTTATTTCTGCTAAAGAAGCTATCTTTAGGAGCACGGAAACTGCTTTTGAATCAAGGGGCCTAATAGCTTTGTTTGATGAAATTCTTAATCAGCCTGATCCTACAGAAGCTCTTCGAAAAGTGATAGATCCTAGGCTTGGAGATAACTATCCAGTTGATTCAGTTCTCAAAATGGCGCAACTTGCCAAAGCATGCACGCAGCAAGATCCACAGCGGCGTCCAAGCATGAAAGTTATTGTGGTTGCTCTGATGACACTTTCTTCTAACACTGAGAATTTTGATGTTGCCACCTTCTACGAAAATCCTAATCTTGTCAATCTAATGTCTGGAAGATA 1697 0.4019 MASDVLTKAEDIVSYNADKIPNKDILPSTIRIDVPFPCECIEDEFLGHTFQYSLSSEETYTTIAQGNFSNLTTDVWIQRFNRFSETELPDSGTINVTINCSCGKREVSNDYGLFVTYPLREEDSLESIANETKLDAALLQQYNPGVNFSQGSGLVFIPGKDQNDSYVPLPPPSAEGLDGGTVAGISVGVAALLFFVVCIFVGYYWRKKRGYGEMLSAQDMKDTTTGNVEYETFGSGGPGGATGITSIMVDKSVEFSYEELANATDNFSVANKIGQGGFGAVYYGELRGEKVAIKKMEMKASKEFIAEVKVLMNVHHLNLVRLIGFCVEGSLFVVYEFIDNGNLSQHLRSSGKEPMPWSIRVQIALDSARGLEYIHEHTHPIYIHRDIKSANILIDRNFRGKVADFGLAKLTEGSSTIMTNQPVGTFGYMPAEYLQFGDVSSKVDVYAFGVVLYELISAKEAIFRSTETAFESRGLIALFDEILNQPDPTEALRKVIDPRLGDNYPVDSVLKMAQLAKACTQQDPQRRPSMKVIVVALMTLSSNTENFDVATFYENPNLVNLMSGR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00745 565 PANTHER LYSM RECEPTOR KINASE 1B 11 565 - -
Bva12g00745 565 ProSiteProfiles Protein kinase domain profile. 267 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00745 565 SMART serkin_6 267 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00745 565 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Bva12g00745 565 SUPERFAMILY Protein kinase-like (PK-like) 246 537 IPR011009 -
Bva12g00745 565 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 565 IPR044812 GO:0019199|GO:0045087
Bva12g00745 565 Gene3D Transferase(Phosphotransferase) domain 1 338 556 - -
Bva12g00745 565 Pfam Protein tyrosine and serine/threonine kinase 269 536 IPR001245 GO:0004672|GO:0006468
Bva12g00745 565 Gene3D Phosphorylase Kinase; domain 1 246 337 - -
Bva12g00745 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00745 Bva-Chr12 8871049 8875362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00745 12 565 Receptor kinase-like Gene Family AT3G21630 58.781 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g00745 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00745 - K13429 gmx:100777781 755.362