Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00732 ATGGAAATCTCGAACAATGTTTTCTATGCTGCCATTGttggttttcttctcttaaatTTCCATGCTTTATTCTCAGAAGCTCAGCAAGAATAcacaaacaacaaacaatCAGATTGTGGAAATCCCACCAACGCCACACTGGGTAATGCTTGTAATAGCGTCAGTTCCTGCCTCTCCTACCTCACCTTCCGATCAATTTCCCCTTATACCACCCCCGCCACCATAGCCTCTCTCTTGAACTCCACCGCCGCCGCCATATCCACCGCTAATGACTTATCCGGCGACGCCGATGAAGCCATCCCGGTGACCACCAATTTAATCGTTCCGGTTAACTGCTCCTGCTCCGGATCAGGCCTTTACTATCAGTACAACTCTTCTTATGTTTTGAAGACAAACGATACATATTTTTCAATGGCTAATAGCACTTTCCAGGGACTCACCACTTGCCAAGCTCTCATAGCTCAGAACACTTATGGCGAGAGAAATCTTACATCTGGGCTCAACGTGAGCGTGCCTCTCCGGTGCGCTTGTCCAACTTCGAACCAGACCCAAGCTGGGTTCAAGTATTTGATAACCTATATGATTTCTCAAGGGGAGTCTGTTGGTTCAATTGCTCAGCAATTCGGAGTCGATGTTCAAAGTGTTTTGGATGCAAACAAGCTGTCTGGAAATAACATATTCTTCTTCACCCCACTCATGGTTCCCCTGAAACAAGAGCCCAACAAAACCCAGTTAGTCATAACAACAACAACGCCGCCGCCGCCTCCACCTCCGCCGTCAGCGGTCCCCAGTGGAGATGGAGATTCAGACTCTTCTACGAAATGGGTCATCGTTGGAGTCGTGGTTGGAGCTGGTTTGGTTGTCATTTTGGgaattttcctcttcttttattgccgccgccgccgccaaTCTCAGCTGCCGGAGGCAAAGAAAGTCTCCGTTTCTGAAATTGACACGGGCAAAAATCTCTTCGATTCCTCCACGAACGAGTCGTGGTCGGTTTCATTGGATGGTCTCCGCGATGCTGTTGCTTCTTTAACAGTGTACAAATTCGAGGAATTGCAGAAAGCTACGAACTTTTTCAGCGAAAAGAACAGAATCAAGGGATCTGTTTACAGAGCATCATTCAAGGGAGACGATGCTGCTATTAAGGAGCTTCAAGGAGATGTCTCCGGTGAAATCAACATCCTTGTACAAATCAACCACACAAACATCATAAGGCTTTCTGGGTTCTGTGTCTCCAAAGGAAACACTTACCTCGTTTACGAATTTGCCCAAAACGGTTcactagacaattggcttcacTCCACTAAGCATGAGAATTCCATCACTCTGAATTGGAAGCAGAGGGTTCAGATTGCATATGATGTAGCTGATGCTTTGAATTACCTGCACAATTACACGAACCCAGTTCATATCCACAAGAACTTGAACAGTGGGAATGTGCTTCTGGATTCAAATTTCAGAGccaaagtttcaaactttggGTTAGCAAGAACAGtgaatgatgaagaagaaggggGATTTCAATTGACAAGGCATGTGATAGGAACTCGAGGATATATGCCTCCTGAGTACACTGAAAATGGAGTGATTTCCCCAAAAATGGatgtttttgcttttgggGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGCCATTGCTGGGGAGGTGATGCTAGCTGCATCTATCAGCGATGTGCTCGAAGGAAAAGATGGTGAGAGGGAGAAAATCCGGGTCTTCATGGATCCGATTTTGGACTCCGAATACCCATTGGTTTTGGCACACTCTTTGGCCCAGCTTGCAAAACGTTGCGTTTCATCTGACTACAATTCTCGACCAGCAATGTCTGAGGTTTTGACGACTCTGTCCAAGATTCAATCCACTACGTTAGATTGGGATCCATCTGAGGAAAGCTA 1922 0.4261 MEISNNVFYAAIVGFLLLNFHALFSEAQQEYTNNKQSDCGNPTNATLGNACNSVSSCLSYLTFRSISPYTTPATIASLLNSTAAAISTANDLSGDADEAIPVTTNLIVPVNCSCSGSGLYYQYNSSYVLKTNDTYFSMANSTFQGLTTCQALIAQNTYGERNLTSGLNVSVPLRCACPTSNQTQAGFKYLITYMISQGESVGSIAQQFGVDVQSVLDANKLSGNNIFFFTPLMVPLKQEPNKTQLVITTTTPPPPPPPPSAVPSGDGDSDSSTKWVIVGVVVGAGLVVILGIFLFFYCRRRRQSQLPEAKKVSVSEIDTGKNLFDSSTNESWSVSLDGLRDAVASLTVYKFEELQKATNFFSEKNRIKGSVYRASFKGDDAAIKELQGDVSGEINILVQINHTNIIRLSGFCVSKGNTYLVYEFAQNGSLDNWLHSTKHENSITLNWKQRVQIAYDVADALNYLHNYTNPVHIHKNLNSGNVLLDSNFRAKVSNFGLARTVNDEEEGGFQLTRHVIGTRGYMPPEYTENGVISPKMDVFAFGVVILELLSGREAIAGEVMLAASISDVLEGKDGEREKIRVFMDPILDSEYPLVLAHSLAQLAKRCVSSDYNSRPAMSEVLTTLSKIQSTTLDWDPSEES 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00732 640 SUPERFAMILY LysM domain 191 235 IPR036779 -
Bva12g00732 640 MobiDBLite consensus disorder prediction 248 268 - -
Bva12g00732 640 PANTHER PROTEIN LYK5 17 639 - -
Bva12g00732 640 SMART LysM_2 192 235 IPR018392 -
Bva12g00732 640 Pfam Protein tyrosine and serine/threonine kinase 386 624 IPR001245 GO:0004672|GO:0006468
Bva12g00732 640 ProSiteProfiles Protein kinase domain profile. 340 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00732 640 CDD LysM 191 225 IPR018392 -
Bva12g00732 640 Pfam LysM domain 193 235 IPR018392 -
Bva12g00732 640 Gene3D Phosphorylase Kinase; domain 1 320 424 - -
Bva12g00732 640 SUPERFAMILY Protein kinase-like (PK-like) 344 628 IPR011009 -
Bva12g00732 640 ProSiteProfiles LysM domain profile. 191 234 IPR018392 -
Bva12g00732 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 639 - -
Bva12g00732 640 Gene3D LysM domain 178 246 IPR036779 -
Bva12g00732 640 MobiDBLite consensus disorder prediction 249 263 - -
Bva12g00732 640 Gene3D Transferase(Phosphotransferase) domain 1 425 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00732 Bva-Chr12 8794141 8796393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00732 11 639 Receptor kinase-like Gene Family AT2G33580 50.000 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva12g00732 PK_Tyr_Ser-Thr 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00732 - - gmx:100818534 716.072