Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00715 ATGGGCAagaatattgtttttaaaGAATCTCAGCATAATCCTGGTAACAGATCTAGGTTGTGGTTACAAGAAGATATCGATCATGTATTGAGAATGAATAAGGGATCTGAATTCATTCAAGCTATAGCTTTGGAGCCACAAGAACCATATGAAGCACATTGGGACCCCAAAGCCTTCACAAACATGTGCAATCTTAGATTactcaaaatatcaaatgtgCACCTTCCCCTTGGTCTCAAGTATCTTCCTAATTCACTAAAAGTTCTTGAATGGGAAGGATGTTCTTTGAAGGCCCTGCCTATTGGTGTGCAAGATGAACTCGTTGACCTGAGAATGCTCCGCAGCAAAATGATAAAACCTTGGAATGGAACTCGATTTTTTGGAAAGCTAAAGTCTATTGATTTGAGTCATTCCAAAGATCTCACTCAAACTCCAATCATCTCTGGGATTCCACATCTTGAACGATTGATTCTTGAAGGTTGTACAAGCCTTGTTAAAATTCACCAATCTATTGGACAGCACAATAAGCTTGTCGAATTGAACGTAAAAGATtgcataaatcttaaatccttCCCAGGTAAGATTGAAATGAGTTCTCtaaagaattttattctttctggttgctcaaaaattcaaaagcttCCTGATTTTGGAGAGAATATGGAATCCCTATCCGTTCTTGATTTGAAGGATTGTATAAATGTTGTTTGCCTTCCAAATACCATTCGTTATCTGAAGTCTCTCAAAACCCTCAATATTTCTGGTTGCCCCAAACTTTCTCAGCTGCCAAACAACATGGATGAAAATGAGGCTTTGGAGGAGCTAAATGTGAGTGGAACTGCAATTAGAGATTTGATTTCATCCCACACAATGGAATTAACGCTCTCCCCCAGGTGGAAGTTTATGAGGCCTTCTATTCCGATTGGCATGATGCATACTCCTATCTTACGATTGTCCTTTTTGAAGGAATTGAGTTTGGCTAGTTGCAATCTCATTGATGGATCCATTCCTGATGATCTTAGCTGCTTATCTTCATTGCATAGTATCGATCTTAGTGGGAATGATTTTGTTAACCTGCCTGTTTATTGTATTGCCAATCTTTCTAAGCTGTGTTCTCTTAGCTTGAATTCTTGCACAAGGCTTGAGATGCTTCCGGTCCTTCCACAATACTTAGAAAGCTTAAATGCAAGAGATTGTGCTTCACTGCAACCTATATTTGATCGACTACAGCTATGGAATCTCTTTCCCCTAGATGAACATGAGATAAAACCTTCAGCCCAGCGAGCTCTGTTCATTACAGGCAGTGCAATTCCACCCTGGTTtgacaatgaaaattttgctttttgtGACGCAGAGGCAGCACATCTGAATTTTGATGTGGATTCAATCATATCAATAGTAGTAGACATCCCTCAATACTGCCGTGAGAGTGAATGGTGGAGGGTTGATGTATGCCTTGTGTTGGAATATGTGGAGTCTTCTACTTTGATCAGCCGCGATCCCTCTGATTCCTTTATatcttttgtttatataatggGTAAAGCTACTGAACCTGATTCTCCTCTCTACTATGATTTTGTGATACGGAAGTTTGTGACTCTAGATCGCCCTCACCTTTGGATTACTTCTTTGAGAACTTTACATGAACATCTAAGAGGTGATAGCAACCGGCTtcacttgttcttttttaCAACAACATATCCAAAATTCGGCAAGATGAAAATAAGGCAAGGTGGTTGCCATGTTTACTgcaaagaagaagcagaaagtTGGCATAGAGCAAGGAATTACTTGGAGAATACCATCCCTTCAAATTCGGAGTATTCAAGCAGTCTGAGAGTATCCCTTCCTACTCCAGCGGTTTCAACAGGACAAGAGGTAGAGGAATTGCCTATGACAAGTGATACTCTGAATAATTCAAAGGAGAACATATTACCAGCACAAATGCAGGAGCCAAACCCCAACAAAGACAgatcaaataaaatGTGTGCGAAGCCTAGTCCAAGCATGAGTGAAACCAGTGGCTCAAGATTCAGATTTCTCAATAAGAGGTGCATCTGTGAGCAAATAGCTGCCTTGAGGGTCTCGGAATCTGAAGAACTCTACTATGTTTGTGAGGATAACAAGTGCAATTACTTCGAATGGTGGAGCCCTAGTTCTTCTAGTGACAAAAACCGATGCAGTGAAAATGTTGGACATGAGCTTCAGTTGCCGCAACTTAAAATTGACGAGTTTGGGGTGTTGAGGATGCACGATTTGCTTCAAAGGATGGGTAGGAATATTGTTTCTCAAGAATCTCAATATAATCCTGGCAATAGAAGTAGATTGTGGTCCCAAGAAGATATTGATCAAGTTTTGAGAATGAAGAAGGGAACTGAATTAATTCAAGGGATAGTTTTGGGGCCACAAGAACCATATGAAGCATATTGGGACCCTGAAGCCTTCACAAAGATGTGCAATCTTAGATTACTCAAGTTATCAAATGTGCATCTTCCCCTTGGTCTCAAGTGTCTTCCTAATTCATTAAAAGTTCTTGAATGGGAAGGATGTTCTTTGAAGGCCCTGCCTCTTGGTGTGCAAGATGAACTCGTTGACCTGAGAATGCACCACAGCAAGATGATAAAAACTTGGAATGGAACTCGATTTTTTGGAAAGCTAAATTCTGTTGATTTGAGTCACTCCAAAGATCTCGCTGAAACTCCTATCGTCTCTGGGATTCCATATCTTGAACGATTGATTCTTGAAGGTTGTACCAGCCTTGTTAAAGTTCACCAGTCTGTTGGGCAGCACAATAAGCTTGTAGAACTGAACTTGAAAGATtgcataaatcttaaaaccttCCCAAGTAAGCTTGAAATGAGTTCTCTAAagaatttcattctttctggTTGCTCAAAAGTTCATAAGCTTCCTGATTTTGGAGAGAATATGGAATCCCTATCGGTTCTTGATTTGAAAGATTGCAAAAATATAGTTTGCCTTCCAAATACCATTCGTAATCTGAAGTCTCTCAAAATCCTTGATATTTCTGGTTGCCCAAAACTTTCTCAGCTGCCAAACAACATGGATGAAAATGAGGCTTTGGAAGAGCTAGATGTGAGTGGAGCTGCAATAAGAGATTTGATTTCATCCAACTCAATGGAATTACCTCTCTCCTCCAGGTGGAAGTTTATAAGGCATTCTACTCCATTGGACATGATGCATACTCCTATCTTACAATTCTCTTTTTTGAAGGAATTGAGTTTTGCAAGTTGCAATCTCATTGATGGATCCATTCCTGATGATCTTAGCTGCTTATCTTCATTGCAGAGGATCGATCTTAGTGGGAATGATTTTGTTAACCTGCCTGTTTATTGTATTGCCAATCTTTCTAAGCTGTGTTCCCTTAGCTTAGATTCTTGCACAAGGCTTGAGAAGTTTCCAGTCCTTCCACAATACTTAGAAAATTTAAGTGCAAGAGATTGTGCTTCGCTGCAACCTATATATGATCCACTACAGCTATGGAATCTTTTTTCCCTGGATGAACATAAGATAAAACCTTCTGCCCGCCGGTATTCATTCATTACAGGCAGTGTAATTCCGCCTTGGTTtcacaatcaaaattttacttttcttgaCGCAGAAGTAGCACATCtgaatttggatttggattcaATCGTATCAATAGTAGTAGACATCCCTCAGTACTGTCGTGAGAGTGAATGGTGGAGAGTTGATGCATGCCTTGTGTTGGAATATGTGGAGTCTTCTCCGAGGAGCCGCGATCCATCTGagtcatttttatcttttgtttataCAAGGGTTAAAGCTACTGAACCTGGCTTCCCCTCCTACCATGATTTTCTGATACATTTATTAGACACTTTAGATGGCCCTCATCTTTGGATCACTTCTTTGAGAACTTTACACGAACAGCTAAGAGGTGATAGCAACCAGCttgaattgttattttttaccaGAACTGTTCCACACTACGGCACCATGAAAATTAGGCAGTGCGGTTGCCATGTTTACGGTAAAGAAGATGCAGAAAGTTGGCATATAGCAAGGAATAACTCTGAGAATATCATTCCTTCAAATTCTGACTATTCGAGAATATCCCTTCCTATTGCAAGTGCTGCTGCAGTCTCAACAGGACAGTTAGAGCAATTGCCTATGACAAGTGATGCTCTGAATAATTCAAGGGAGAATGTACTGCTACCACAGATGCAGGAGCCAGAACACAACGAAGACAAGTCAAATAAAATGTCTTTGAAGCCTAGACCAAGCATGGGTGAAACCAGTGGCCCTAGACTCAGATTTCGCAATAAGAGATGCATCTGTGAGCAAAGAGCTGCCTTGAGGGTCTCAGAATCTGAAAAACTCTACTATGTTTGTGAGAATAACAAGTGCAATTACTTCGAGTGGTGGATCCCAGATTTTTCTAGTGATGAAAACCTATGCTATGAAAACGGTGGACAAGAGCTTCTGTTGCCTGAAAAGGGAAAACACGGGGACCAAAACTTGGTGGCTTCTCATGGGCAGCTTAAATTGTTAGTGATGACAAACTTGATCTTGTCAATATTTGCTATCATATGTCTATGTTTCAAGTTATTATTTCGAAAATA 4607 0.3814 MGKNIVFKESQHNPGNRSRLWLQEDIDHVLRMNKGSEFIQAIALEPQEPYEAHWDPKAFTNMCNLRLLKISNVHLPLGLKYLPNSLKVLEWEGCSLKALPIGVQDELVDLRMLRSKMIKPWNGTRFFGKLKSIDLSHSKDLTQTPIISGIPHLERLILEGCTSLVKIHQSIGQHNKLVELNVKDCINLKSFPGKIEMSSLKNFILSGCSKIQKLPDFGENMESLSVLDLKDCINVVCLPNTIRYLKSLKTLNISGCPKLSQLPNNMDENEALEELNVSGTAIRDLISSHTMELTLSPRWKFMRPSIPIGMMHTPILRLSFLKELSLASCNLIDGSIPDDLSCLSSLHSIDLSGNDFVNLPVYCIANLSKLCSLSLNSCTRLEMLPVLPQYLESLNARDCASLQPIFDRLQLWNLFPLDEHEIKPSAQRALFITGSAIPPWFDNENFAFCDAEAAHLNFDVDSIISIVVDIPQYCRESEWWRVDVCLVLEYVESSTLISRDPSDSFISFVYIMGKATEPDSPLYYDFVIRKFVTLDRPHLWITSLRTLHEHLRGDSNRLHLFFFTTTYPKFGKMKIRQGGCHVYCKEEAESWHRARNYLENTIPSNSEYSSSLRVSLPTPAVSTGQEVEELPMTSDTLNNSKENILPAQMQEPNPNKDRSNKMCAKPSPSMSETSGSRFRFLNKRCICEQIAALRVSESEELYYVCEDNKCNYFEWWSPSSSSDKNRCSENVGHELQLPQLKIDEFGVLRMHDLLQRMGRNIVSQESQYNPGNRSRLWSQEDIDQVLRMKKGTELIQGIVLGPQEPYEAYWDPEAFTKMCNLRLLKLSNVHLPLGLKCLPNSLKVLEWEGCSLKALPLGVQDELVDLRMHHSKMIKTWNGTRFFGKLNSVDLSHSKDLAETPIVSGIPYLERLILEGCTSLVKVHQSVGQHNKLVELNLKDCINLKTFPSKLEMSSLKNFILSGCSKVHKLPDFGENMESLSVLDLKDCKNIVCLPNTIRNLKSLKILDISGCPKLSQLPNNMDENEALEELDVSGAAIRDLISSNSMELPLSSRWKFIRHSTPLDMMHTPILQFSFLKELSFASCNLIDGSIPDDLSCLSSLQRIDLSGNDFVNLPVYCIANLSKLCSLSLDSCTRLEKFPVLPQYLENLSARDCASLQPIYDPLQLWNLFSLDEHKIKPSARRYSFITGSVIPPWFHNQNFTFLDAEVAHLNLDLDSIVSIVVDIPQYCRESEWWRVDACLVLEYVESSPRSRDPSESFLSFVYTRVKATEPGFPSYHDFLIHLLDTLDGPHLWITSLRTLHEQLRGDSNQLELLFFTRTVPHYGTMKIRQCGCHVYGKEDAESWHIARNNSENIIPSNSDYSRISLPIASAAAVSTGQLEQLPMTSDALNNSRENVLLPQMQEPEHNEDKSNKMSLKPRPSMGETSGPRLRFRNKRCICEQRAALRVSESEKLYYVCENNKCNYFEWWIPDFSSDENLCYENGGQELLLPEKGKHGDQNLVASHGQLKLLVMTNLILSIFAIICLCFKLLFRK 1535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00715 1535 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 748 976 - -
Bva12g00715 1535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 748 976 IPR044974 GO:0006952
Bva12g00715 1535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 228 IPR044974 GO:0006952
Bva12g00715 1535 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 228 - -
Bva12g00715 1535 MobiDBLite consensus disorder prediction 647 675 - -
Bva12g00715 1535 Gene3D Ribonuclease Inhibitor 808 950 IPR032675 -
Bva12g00715 1535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 955 1236 IPR044974 GO:0006952
Bva12g00715 1535 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 955 1236 - -
Bva12g00715 1535 SUPERFAMILY L domain-like 50 406 - -
Bva12g00715 1535 MobiDBLite consensus disorder prediction 1401 1431 - -
Bva12g00715 1535 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 200 503 - -
Bva12g00715 1535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 200 503 IPR044974 GO:0006952
Bva12g00715 1535 SMART LRR_typ_2 1001 1025 IPR003591 -
Bva12g00715 1535 SMART LRR_typ_2 245 269 IPR003591 -
Bva12g00715 1535 SMART LRR_typ_2 1099 1122 IPR003591 -
Bva12g00715 1535 SMART LRR_typ_2 343 366 IPR003591 -
Bva12g00715 1535 SUPERFAMILY L domain-like 806 1165 - -
Bva12g00715 1535 Gene3D Ribonuclease Inhibitor 219 419 IPR032675 -
Bva12g00715 1535 Gene3D Ribonuclease Inhibitor 1027 1181 IPR032675 -
Bva12g00715 1535 Gene3D Ribonuclease Inhibitor 952 1026 IPR032675 -
Bva12g00715 1535 Gene3D Ribonuclease Inhibitor 54 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00715 Bva-Chr12 8672101 8682993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00715 2 288 WRKY Transcription Factor Family AT4G12020 36.923 4.25e-39 158