Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00706 ATGGCAACCACCCTGCAACTTCAAATCTTCTCAATCGAAGAACGAGAATCCAATCCACAAGTTCCTTGTTGCGATTGCTTGAACATCaagtttcaatatttttcttaccaGACAGTTCACCCTTCAAATCCCCGCAGGCCCCTCACCGTATTTAGGGAGCATCAATTCTCGTTCCCCTGCGATCTCTTCCGGGACAATGGCGACAACCTCTTGGACGGCGCATTCTCCGCCGTGGACATTCCCTCGGAGCTGTGGAATATTGTCTCGTCCCGTGTAGTTTATTTCGCGAAAAACATGGTTGCAGCTGACAACGGCAAAGGGTCGAGTCCTGTGTTGAACATGGCCGTGAGAATTCATGTGAGAAACCATACGCCCAGGGACGGTGATGATAGTTGCCGCCGGCAAGTGTCGAGGAAAAGctttattaattcattgttGAAAGTTAGAGTTGTTGGTGACGATGATGCTTGTTGCAGTATTTGTTTGGACAAGTTCGGTGATCTAACGTCGGAGGTTGTCGGAACGCCGTGCTCGCATGCCTTCCACCAAGATTGTATTCTACGGTGGCTCAAGAATCATTGGTCTTGCCCATTGTGCCGCTACCAAGTCTTCtg 614 0.4723 MATTLQLQIFSIEERESNPQVPCCDCLNIKFQYFSYQTVHPSNPRRPLTVFREHQFSFPCDLFRDNGDNLLDGAFSAVDIPSELWNIVSSRVVYFAKNMVAADNGKGSSPVLNMAVRIHVRNHTPRDGDDSCRRQVSRKSFINSLLKVRVVGDDDACCSICLDKFGDLTSEVVGTPCSHAFHQDCILRWLKNHWSCPLCRYQVF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00706 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 204 IPR013083 -
Bva12g00706 204 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 136 202 - -
Bva12g00706 204 SMART ring_2 158 199 IPR001841 -
Bva12g00706 204 SUPERFAMILY RING/U-box 147 203 - -
Bva12g00706 204 Pfam Ring finger domain 158 200 IPR001841 -
Bva12g00706 204 ProSiteProfiles Zinc finger RING-type profile. 158 200 IPR001841 -
Bva12g00706 204 PANTHER F6A14.12 PROTEIN-RELATED 136 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00706 Bva-Chr12 8616843 8617566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00706 147 203 C3H Transcription Factor Family AT1G80400 47.368 4.15e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00706 - K11982 fve:101301942 81.6481