Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00691 ATGAGgaaaagggagagagagaatcCTTGTGGGGTGTGTGGCCACTATCACAAGTATGAAGAAGGGGAAGTCTGTTCGATTTGCGGCCACCGAATTCCTGTCGCATCGGAGAAACCTTCAATTCAAGTCAGTGCCTTTCCGTCAGTGATTTTGCCGGAGTTTCTTTACTTGGGCAGCTACGATAACGCATCCCGCTCGGAGCTGCTCAAAACTCAGGGAATCTCTCGTATCCTCAATACGGTTCCTTCTTGTCAGAATCTCTACAAAAACTCATTTACATATCACTGCCTACCAGATGACAAAGCTTTGCCATTTGATGATGCAATTGAGTTTCTAGAACAATGTGAGAGAGACAAGGCTCGTGTCCTGGTTCATTGCATGTCAGGAAAGAACAGATCTCCAGCTATTGTGATTGCATATCTGATGAAGTCCAAGGGATGGAGATTGGCTCCGAGTTACCAATGGGTAAAAGAGCGTAGACCTTCTGTTGAATTATCTCAAGGTGTCTATCAGCAACTGCAGGAGTATGAGCACAAGCTCTATGGATCCATTGACAGTGGCACCTCTCTGCTGCCTGCGTTCCCACATGCCGCGCCTCCTTCAATTAGCTTTGGCTTCCCAAAGACTAATGACGCAGCTGCTCCTCCCCCTGCCTTCGGCAATGCTGCAGCTACATCCATTTTTTCGCAATCGACGCTAGACATTCCTCCGACAGAGTTTACATTTGGAGCTGGTCAGGCTCAGAAGAGTGCCACTGGAAATCCATTCAATGTCAATCCGAGTAATCCAAACGGCAGTGATATCCAAATGGATGGTTCTTG 821 0.4629 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVASEKPSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKALPFDDAIEFLEQCERDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLAPSYQWVKERRPSVELSQGVYQQLQEYEHKLYGSIDSGTSLLPAFPHAAPPSISFGFPKTNDAAAPPPAFGNAAATSIFSQSTLDIPPTEFTFGAGQAQKSATGNPFNVNPSNPNGSDIQMDGS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00691 273 SMART ptp_7 83 185 IPR003595 -
Bva12g00691 273 Gene3D Protein tyrosine phosphatase superfamily 41 186 IPR029021 -
Bva12g00691 273 MobiDBLite consensus disorder prediction 239 273 - -
Bva12g00691 273 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Bva12g00691 273 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Bva12g00691 273 CDD DSP_plant_IBR5-like 47 176 - -
Bva12g00691 273 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Bva12g00691 273 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Bva12g00691 273 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 273 - -
Bva12g00691 273 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 273 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Bva12g00691 273 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Bva12g00691 273 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00691 Bva-Chr12 8526871 8531765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00691 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.923 3.18e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00691 K04459 - gmx:100806021 473.011