Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00688 ATGGCTTTGATTTCCTCAGATGATTACAGTGATTGCAAGTTACTAAACATaccttcaaaattttccataTTGTTGTGTAAAATAGGACACGATAGGCCCAAGCATAAATCAATTGGAGCTAGGGGTTACTCCTATCGACCTCTTCGATTTTGGATTTCCACGCTCTCAGAAACTGATACATTAATCATGCCAAAGAATAAGGGTAAGGGAGGTAAGAACAGGAAGAGAGGAAAGAATGAGGCAGATGATGAAAAGCGAGAGCTTGTTTTTAAGGAAGATGGGCAGGAGTATGCCCAGGTGCTTCGCATGCTTGGTAATGGCCGATGTGAAGCAACGTGTATTGATGGGACTAAGCGGCTCTGTCATATCAGGGGAAAGATGCACAAGAAAGTCTGGATTGCAGCCGGGGACATCATACTTGTAGGTCTTCGTGATTATCAGGATGACAAGGCTGATGTCATTCTGAAGTACATGGCCGATGAAGCAAGGCTGCTTAGGGCATATGGTGAACTTCCTGAAAGCATACGTCTCAATGAGGGCATTGCTGGAGGTTTGGAGGACGAGGAAGAAGGCGGCGCTGATGATTATATTGAGTTTGAGGATGAAGATATTGATAAGATCTA 623 0.4302 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMADEARLLRAYGELPESIRLNEGIAGGLEDEEEGGADDYIEFEDEDIDKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00688 145 Gene3D - 2 145 IPR012340 -
Bva12g00688 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 1 145 - -
Bva12g00688 145 MobiDBLite consensus disorder prediction 1 25 - -
Bva12g00688 145 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Bva12g00688 145 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Bva12g00688 145 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Bva12g00688 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Bva12g00688 145 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Bva12g00688 145 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Bva12g00688 145 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bva12g00688 145 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bva12g00688 145 SUPERFAMILY Nucleic acid-binding proteins 2 144 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00688 Bva-Chr12 8515748 8517169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00688 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.276 2.43e-89 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00688 K03236 - mnt:21387550 233.032