Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00681 ATGCCGCAACAGCGCCCTTCCTGGACCATCGACCCTGACATAGACGGCATCGATCTCGAGCCCTCCGATTTTGGCTCCTCCTTGCCCCTAAAGAAGGTCCCAAACGGCGACGTTTTCGAGGCATCCCGCGCCGGCGACGTTGAGCGGCTCCGATACCTGCTTGAGTCCGGAGTGAATGTGAATGCTCGGGACCGGTGGGATTCTGTGGCCCTCTACTATGCTTGCCTCGCAGGTCACCTTGATGCTGCGAGGATGCTGCTTGAAAGTGGTGCTATCTGCTCCGAGCACACCTTTGATGGTGACCGATGCCATTATGCTGCGCTCAATTTAAAGgatgattttttaatactcaaGTATTTCATCCACTCAGGGATCCAATCACAATCACTTTTTTACATACAAGGAAGACCTATTGAAGCTCATAGAATCATACTAAGTGCAAGGTCAccattttttaagaaagagcGCAGGGAAGGAATTCTTGAGAAAGAACTAATCCATCACAAGTTTGCAGAGTATAAAGCACTGAGGGATGTAGACAATTCACAGAAACGATTTATTTTACAGGGTCTTTCCTTTCCTGAAGAAGACAGGCTTCCAGCAGCTTTACACCGAGCCCTTCTGCTTGCCCTGTCAAATTCTACTCTTGAAAGCAGTCAAGATGATggatttgataaattgatttctgGGACGAGTGCAATGCAGATAGCTGATGATATTGATGATTGTGCGGATGTTTGTGTGATAGTAGATAAAAAGTTTTCCGCTGCCATCAAGTTATTTTA 785 0.4433 MPQQRPSWTIDPDIDGIDLEPSDFGSSLPLKKVPNGDVFEASRAGDVERLRYLLESGVNVNARDRWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKDDFLILKYFIHSGIQSQSLFYIQGRPIEAHRIILSARSPFFKKERREGILEKELIHHKFAEYKALRDVDNSQKRFILQGLSFPEEDRLPAALHRALLLALSNSTLESSQDDGFDKLISGTSAMQIADDIDDCADVCVIVDKKFSAAIKLF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00681 261 ProSiteProfiles BTB domain profile. 127 153 IPR000210 GO:0005515
Bva12g00681 261 Gene3D - 30 116 IPR036770 -
Bva12g00681 261 SUPERFAMILY Ankyrin repeat 40 122 IPR036770 -
Bva12g00681 261 Pfam Ankyrin repeats (many copies) 40 87 IPR002110 GO:0005515
Bva12g00681 261 Pfam BTB/POZ domain 130 177 IPR000210 GO:0005515
Bva12g00681 261 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 159 254 IPR044515 -
Bva12g00681 261 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 9 155 IPR044515 -
Bva12g00681 261 ProSiteProfiles Ankyrin repeat profile. 41 65 IPR002110 GO:0005515
Bva12g00681 261 SUPERFAMILY POZ domain 116 175 IPR011333 -
Bva12g00681 261 Gene3D Potassium Channel Kv1.1; Chain A 117 251 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00681 Bva-Chr12 8471995 8473488 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g00681 BTB 5.8e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00681 K10520 - mnt:21402970 310.842