Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00647 ATGCCGGCTGAGAATTCCAACAGTTATGATCGAGAAGGAGAGCCATTTGTTGAAGTCGACCCAACTGGCAGGTTTGGGCGTTACACTGATCTGCTTGGCTCTGGTGCTGTCAAAAAAGTTTACAGGGCATTTGATCAGAAAGAGGGCATAGAGGTTGCATGGAATCAGGTTCGACTTAGGTATTTCAGTGAAGACCCTGTGCTCATTAATCGGCTTCACTCTGAGGTTGAGCTGCTGAGCACGttgaagaacaaaaatatcattgtTTGTTATAATGTCTGGAAAGATGATGAGCGGAACACCTTAAACTTTATCACTGAGGTGTGTACTTCTGGGAATCTGAGAGAGTACAGGAAAAAACATCGTCATGTGTCTATTAAGGCTTTGAAGAAGTGGTCTAAGCAAGTCCTTGAAGGATTGGAGTATCTTCACACTCATGATCCGTGTGTCATCCACAGAGATCTCAATTGCAGTAACATATTCATTAATGGGAATATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTACAATGGTGGGAAGGAGCCATGCAGCACATTCAATAATAGGGACACCAGAATTTATGGCACCGGAGCTGTATGAGGAAGATTATACCGAGATGGTGGACATATACTCTTTTGGAATGTGCTTGCTTGAGATGGTCACAATGGAGATACCCTACAGTGAATGTGACAGTGTTGCCAAGATATACAAAAAAGTGACAATGGGAGTACAGCCTGGGGCCTTGAACAAGGTGACAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCATAGCACAGCCGAGGGCAAGACCTTCAGCCACAGATCTTCTCAAGGATCCCTTCTTTTCTGAACTCAACGATGGTGAAGAATTGAACTCAGCCAGTTA 893 0.4367 MPAENSNSYDREGEPFVEVDPTGRFGRYTDLLGSGAVKKVYRAFDQKEGIEVAWNQVRLRYFSEDPVLINRLHSEVELLSTLKNKNIIVCYNVWKDDERNTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLEYLHTHDPCVIHRDLNCSNIFINGNIGQVKIGDLGLATMVGRSHAAHSIIGTPEFMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGVQPGALNKVTDPEVKAFIEKCIAQPRARPSATDLLKDPFFSELNDGEELNSAS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00647 297 CDD STKc_WNK 24 284 - -
Bva12g00647 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 288 - -
Bva12g00647 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Bva12g00647 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00647 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Bva12g00647 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Bva12g00647 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00647 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00647 Bva-Chr12 8254426 8257422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00647 4 284 MAP Kinase Kinase Kinase AT5G55560 77.580 3.20e-174 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva12g00647 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00647 K08867 - zju:107416987 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00647 12 8254426 8257422 Bva12g02661 12 19563349 19565377 BWGD