Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00645 atggtttcttcagACGGAAGTGCAGATCACAATGTTTCTTCTGCTAAATTGCAGCAGACGCTGAGTCCTCATAGCGGAAGTACAGTTTCAGAAGAAATTCATTATAGTACTATTAATTCATCCAAAACAGAGGGGACCAAAAACATTCCTCCTGCTGAGGCTGAGAAAGAAGCACAAAATTCTGATGCTACCACTTGTATAGTGCTATCTGGTCAAGAAGGAAGTACATGCTCTTTAGCACTCATGAAACCTTCGCAGATTCAGATCCCTAATACTGTTTCACATGCATTGCAATCTGGTCAGGACAGTCCCTCTATAGTACGTGAAAAGGTCTCCAAGGATGGATATAACTGGCGAAAATATGGCCAGAAACATGTTAAGGGAAATGAATTTATAAGAAGCTACTACAAGTGTACACATCCAAACTGCCTGGCAAAGAAGCAACTAGAACAGTCACATAGTGGGCAAGTTACAGATACCGTTTGTATTGGTCAACATAATCATCCTAGACCTCAACTATCTACAGTACCATCAGTTGATTTTGTTGTTCCTACTGTTAAAGAAAGACTAGACAAGCCCTCTTTAGCCAACACAGATGATGAAGCATCCACTGAGCATGGATGTGTGCCTCAACAGAAGAAGCCTTTAGATTCCCTTCCTATTTCAACAGTTTCCTCGTGTGATGAGGTTAAAAGTGTGCAGCTACAATCAGCTTTGGTAAAGCATAAGGTTCATAACAAGGAGGATCCTGAGTCAAAGCGGCTTAAGAAAGACAACCATAGTGCTGATGTTACTGGCGTTGAGAAGTCAACTAGTGAATCACGGGTTGTTGTGAAAACCTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGCTGGCGCAAATACGGCCAGAAACTGGTAAAAGGGAGTCCAAATCCAAGGAGTTATTATCGATGCTCAAATCCTGGATGCCCAGCGAAGAAGCATGTGGAAAGGGATTCTCATGATCCAAAAGTTGTGATAACCACCTACGAGGGAAAACATAATCATGAAATGCCCCCTGGAAGAACTGTTACTCAAAATGCAGCGGCAGATACTCAGGTAGCAGCAGCCAATAATGGCGCATCAGGAACCAAATCTGGAGGCACAAGCGAGTTAAATGATCAACTAAACAGTAAGTTGGGTTCTAAACCAAAGGATGGGGTTACCAACCATCCCAGTGAGGATCATCGAAGTAAGTCAAGTAAGCAAGAAAAAGTAGATGGCAACTCTAGTACAAGCAAAGATTCTGTCAGCTTTGATGTTGTTGGCCATTCAAGTTCTGGGGTTCGCCGTAGATCCCATGAGCAGCTGAAAGATAACATAAGAGCTAaatcagaagaaaatgaggaaGATCGCCCTGGTGTGATTTCTGTTCATGATACTCATGGTACAGAGGGTAAACTAAATAAGCGACCTAAGCCTGATTCAGAATCGGTCCAAAGCTA 1469 0.4173 MVSSDGSADHNVSSAKLQQTLSPHSGSTVSEEIHYSTINSSKTEGTKNIPPAEAEKEAQNSDATTCIVLSGQEGSTCSLALMKPSQIQIPNTVSHALQSGQDSPSIVREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCLAKKQLEQSHSGQVTDTVCIGQHNHPRPQLSTVPSVDFVVPTVKERLDKPSLANTDDEASTEHGCVPQQKKPLDSLPISTVSSCDEVKSVQLQSALVKHKVHNKEDPESKRLKKDNHSADVTGVEKSTSESRVVVKTSSEVDFVNDGYRWRKYGQKLVKGSPNPRSYYRCSNPGCPAKKHVERDSHDPKVVITTYEGKHNHEMPPGRTVTQNAAADTQVAAANNGASGTKSGGTSELNDQLNSKLGSKPKDGVTNHPSEDHRSKSSKQEKVDGNSSTSKDSVSFDVVGHSSSGVRRRSHEQLKDNIRAKSEENEEDRPGVISVHDTHGTEGKLNKRPKPDSESVQS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00645 489 SUPERFAMILY WRKY DNA-binding domain 280 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 MobiDBLite consensus disorder prediction 366 392 - -
Bva12g00645 489 MobiDBLite consensus disorder prediction 413 431 - -
Bva12g00645 489 Pfam WRKY DNA -binding domain 113 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 MobiDBLite consensus disorder prediction 1 47 - -
Bva12g00645 489 ProSiteProfiles WRKY domain profile. 282 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 454 - -
Bva12g00645 489 MobiDBLite consensus disorder prediction 435 482 - -
Bva12g00645 489 ProSiteProfiles WRKY domain profile. 107 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 Gene3D WRKY domain 274 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 Gene3D WRKY domain 103 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 MobiDBLite consensus disorder prediction 396 412 - -
Bva12g00645 489 SMART WRKY_cls 112 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 SMART WRKY_cls 287 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 MobiDBLite consensus disorder prediction 366 489 - -
Bva12g00645 489 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 454 IPR044810 GO:0003700
Bva12g00645 489 MobiDBLite consensus disorder prediction 190 215 - -
Bva12g00645 489 SUPERFAMILY WRKY DNA-binding domain 108 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00645 489 MobiDBLite consensus disorder prediction 242 269 - -
Bva12g00645 489 MobiDBLite consensus disorder prediction 242 264 - -
Bva12g00645 489 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00645 Bva-Chr12 8246450 8250377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00645 96 377 WRKY Transcription Factor Family AT2G04880 51.195 1.05e-88 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g00645 WRKY 6.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00645 K18834 - gmx:100781219 535.413