Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00644 ATGCAAGCATCAGAACATCATAGGAGTTCTGAAATGTTCTATCAGCCGATGCAACAAATTGAAGCCTACTGCTGGCCGCAGTATCGAAATTTAAATCAGTTTTACTTAAATGATAGAAACCACGGAAGCCACTTCTCCACTCCAAGTTCTGAACTTTACTGCACATTGGAATCATCCTCAGTAATGACCGGCAGCTTCAACATTTACAACTCTCCTTCAACTGTTACTTTTTCTCCTAATGGAAGCCCAATTTCACAGCAAGATTCTCATTCGTACTCATACCCACCTGACAAGCACCATTCCCCTGACAATGTCTATGGCTCTCCCATGAGTGGATCTTGTGTTACCGATGATTTAAGCTTCAAACACAAGCTAAGAGAGTTGGAAACTGTGATGTTGGGTCCTGACTCTGATAATCTTGACTGCTACAGCAGTGCCTTAAAGGATGGAACAAACTTTGCATCACTTGGGATGGATAGCTGGAGACAAACAATGGTAGCTATTTCTAGTGGTGACCTAAAACAGGTCCTACTTGCATGTGCAAAGGCAGTTGCAGACAATGATTTGTTAATGACACAATGGTTGATGGATGAACTGAGGCAGATGGTATCGGTTTCTGGTGAACCAATTCAAAGGTTGGGAGCTTACTTGTTGGAAGGGCTAGTAGCGCGACTGTCTTCCTCCGGGAGTTCAATCTACAGAGCCTTGAGGTGCAAGGAACCAGCAAGTGCTGACCTCCTCTCTTATATGCACATACTTTATGAGGTTTGCCCCTACTTCAAGTTTGGATACATGTCTGCAAATGGTGCCATTGCAGAAGCTATGAAAAACGAGGACCGAGTTCATATCATCGATTTCCAAATTTCTCAAGGAAGCCAATGGGTGACTTTAATTCAGGCTTTTTCAGCTAGGCCTGGGGGGCCACCCCATATCAAGATTACAGGTATTGATGATTCAACATCAGCTTATGCACGCGGAGGAGGACTGCATATAGTGGGAAAGAGATTGTCTAAGCTTGCTGAGAAATTTAAGGTACCATTTGAATTTCATGATGCAGCTATGTCTGGTTCTGATGTTCAGCCAGACAACCTAGGAGTTCGATCTGGAGAGGCCTTGGCTGTGAATTTTGCATTCATGCTACACCACATGCCCGATGAGAGTGTCAGCACTCAGAATCACAGGGACAGACTGTTGAGGCTGGTGAAGAGGCTATCCCCGAAGGTGGTGACGCTTGTCGAGCAAGAATCAAACACAAATACAGCTGCATTCCTTCCACGTTTCCAGGAAACTCTGGAATACTACGCATCTATGTTTGAGTCAATAGATGTGACTCTCCCATGGGAGCATAAAGAGAGAATCAATGTGGAGCAGCATTGCCTGGCAAGAGATATAGTTAACATTATAGCTTGTGAAGGGGTAGAGAGGGTGGAAAGGCATGAGCTTCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGCTCGTTGGTGAATGCCACCATCAAGAAATTGCTTGAGAAGTACTGTGACAGATATAGGCTTGAAGAGAGAGATGGAGCTCTCTATCTAGGTTGGatgaatagagatttggtcgctTCTTGTGCATGGAAGTG 1631 0.4414 MFESIDVTLPWEHKERINVEQHCLARDIVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNATIKKLLEKYCDRYRLEERDGALYLGWMNRDLVASCAWK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00644 107 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 107 IPR005202 -
Bva12g00644 107 Pfam GRAS domain family 1 107 IPR005202 -
Bva12g00644 107 PANTHER TRANSCRIPTION FACTOR GRAS-RELATED 1 107 - -
Bva12g00644 107 ProSiteProfiles GRAS family profile. 1 107 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00644 Bva-Chr12 8242840 8246156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00644 1 107 GRAS Transcription Factor Family AT5G48150 85.981 1.17e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g00644 GRAS 3.8e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00644 - - gmx:100808300 212.231