Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00627 ATGGAAGGGAAAGAGGCAGCTCTTAAAGCTATAGAGAATGCTGAAAAGCGATTTGCTCTGAGAGACTTTGTTGGTGCAAGAAATTATGCATTAAAGGCCAAAGTGCTATGCCCAGGATTGGAGGGTTTATCTCAAATGGTGACTACATTTGAAGTTTACATTGCTTCTGAGAATAAATGTAATGGTGAAATAGATTACTATTCAGTTCTTGGATTAAAACCTTCTGCAGATAAAGACGCTGTCAAGAAACAGTACAAGAAGATGGCCGTATTGCTTCACccagataaaaacaaaagtgtgGGAGCAGATGGGGCATTTAAGCTTGTATCTGAAGCATGGACTTGGCTATCAGATAGTGCTAAGCGAAGTTCCTACGATCTCAAGAGAAATGGACAGGTTGCTGGGATTAATCAGacaaattcttcttcagtCCATGCTTCAGGGGTTACCGGTTATAACAAATGTTCCAATTTGTCTGCCTCTCATGGTAGGCTTGACACTTTCTGGACCATTTGCACCTCTTGTAAAGTTCAGTATGAGTACCTGCGGAAGTACGTGAACAAGAGACTTTCATGTAAGAACTGCCGTGGCACTTTCATTGCTGTTGAAACTGGGACACCCCCAGCAAGTGGTTCATTCCCATATTGTCCTTGGTCATTTAATGGGTATGGAAGTCATTCATTTGATGGGGTTGCATATGTCCCAAGTAACACTGCCTATTTCAATGGCAATGGTGTCACAGGTTACCATTCTGGACATGGGTATGAGTATGTTCCAAATGTTTCATTTCAGTGGAGCTCAATATCTGGAACTTCTGCAGGACATATCAGTCAAAATGGATCAACTACCTTATCTGCTGATTCTGTTTATCATTCCAATGGAAGTGTTAAGAGAGGAAGACCAAAGGTCAAATCAGGAGTTGATAAGAGGCATCATGTGGCAGAGACTGTGATCAATATACATTCAGATGTTGTATCGTTCTCTTGTAATGAACCACAGGAAGTTAAGCCCCCTAAACCAGATAAGAGAAGGAAAGTTGTTGTGGGAGCGAGTTTCAGAAATGGCAATGAAGAAAAGGGACCAAATTCTGCTCTGGAAGCAAGCTTGCCTAATGGGAATGCAAGCGTTGCACCTGCACAAAAGCCTTCATGCATAAATGAAGTTCAAACTAAACAGTGCTCTATGGCACCAGCATTTGATGctagaaaattattgattGAGAAGGCCAGGACAGAAATTAGGAAGAAACTGGAAGAGATTAAGTTGGCCTCTgaagctgctgctgctgctgctattaaggagagagaaaaagtgcAAGCTGATAATGGTCCAGTCAAAAGAGAGGCATGTAGAAGAGCGGGTTTAGATGGTTCGCAGCAATTAGAGCATAGGAAAACTGGTCCAATCTCAATAAATGTTCCGGATCCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAAGCCAAAGCAAATATGGGCTATTTATGATGAGGAGGATGGCATGCCTCGTTTGTACTGTCTTATCCGTGAGGTCATCTCTGTCAAGCCATTCAAGATTCATATTAGTTACTTGAACTCCAAAACAGATAGTGAGTTTGGGTCTGTCAACTGGCTAGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCATTTACCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGTTTTACCCCGGGAGAAGGCCGGTCGTGGTGGTTGTGTTCGTATATATCCCAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCGCCGGACTGGGACAGGTCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAAGTTCTTGATGATTACTCTGAAGAACTTGGTGTTTGTGTTGCTCCCCTTATCAAGCTTGCTGGATTTAAGACAGTATATGCCAGTAACACAGACAAAAGTGCCATAAAATGGATACCGAGAAGAGAGATGCTGCGGTTTTCGCACCAAGTGCCATCTTGGTCTCTGAAGGGAGGAGAGGCAAGCAATTTGCCTGACAAATGCTGGGATCTCGATCCGGCCGCAACCCCAGATGAGCTTCTTCATGCTACTGCAGAAGCAAATGCTTTGTA 2123 0.4093 MEGKEAALKAIENAEKRFALRDFVGARNYALKAKVLCPGLEGLSQMVTTFEVYIASENKCNGEIDYYSVLGLKPSADKDAVKKQYKKMAVLLHPDKNKSVGADGAFKLVSEAWTWLSDSAKRSSYDLKRNGQVAGINQTNSSSVHASGVTGYNKCSNLSASHGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAVETGTPPASGSFPYCPWSFNGYGSHSFDGVAYVPSNTAYFNGNGVTGYHSGHGYEYVPNVSFQWSSISGTSAGHISQNGSTTLSADSVYHSNGSVKRGRPKVKSGVDKRHHVAETVINIHSDVVSFSCNEPQEVKPPKPDKRRKVVVGASFRNGNEEKGPNSALEASLPNGNASVAPAQKPSCINEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEIKLASEAAAAAAIKEREKVQADNGPVKREACRRAGLDGSQQLEHRKTGPISINVPDPDFHDFDKDRSEECFKPKQIWAIYDEEDGMPRLYCLIREVISVKPFKIHISYLNSKTDSEFGSVNWLDSGFTKSCGNFRAFTSDVVDQVNIFSHVLPREKAGRGGCVRIYPRSGDIWAVYRNWSPDWDRSTPDEVRHQYEMVEVLDDYSEELGVCVAPLIKLAGFKTVYASNTDKSAIKWIPRREMLRFSHQVPSWSLKGGEASNLPDKCWDLDPAATPDELLHATAEANAL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00627 707 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Bva12g00627 707 SUPERFAMILY Chaperone J-domain 60 130 IPR036869 -
Bva12g00627 707 Pfam Domain of unknown function (DUF3444) 470 675 IPR024593 -
Bva12g00627 707 PANTHER BNAC03G44070D PROTEIN 4 700 - -
Bva12g00627 707 SMART dnaj_3 64 121 IPR001623 -
Bva12g00627 707 Coils Coil 406 426 - -
Bva12g00627 707 CDD DnaJ 65 118 IPR001623 -
Bva12g00627 707 Pfam DnaJ domain 65 126 IPR001623 -
Bva12g00627 707 PANTHER BNAC03G44070D PROTEIN 4 700 - -
Bva12g00627 707 Gene3D DnaJ domain 53 151 IPR036869 -
Bva12g00627 707 PRINTS DnaJ domain signature 67 85 IPR001623 -
Bva12g00627 707 PRINTS DnaJ domain signature 85 100 IPR001623 -
Bva12g00627 707 PRINTS DnaJ domain signature 101 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00627 Bva-Chr12 8151920 8155487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00627 14 302 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.841 4.83e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00627 - - gmx:100792639 1142.49