Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00605 ATGGCCGATTCGGATAACGAATCGGGTGGGAACACGAACAACAACGCCAACAGCGAGCTGTCGACGAAGGAGCAGGACCGCTTCTTGCCGATCGCGAATGTGAGCAGGATAATGAAGAAGGCGCTGCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAATGCGTATCGGAGTTCATAAGCTTCATAACCGGCGAGGCCTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTACTCTGGGCGATGACGACCTTGGGCTTCGAAGAGTACGTGGAGCCCTTGAAGATTTACCTCCAGAAGTATAGGGAGATGGAGGGGGAAAAGACCTCTATGGGAAGGCAGGGTGAGAAGGACGGTGGTTCCGGTGGTGGGTCATCTGGCAGCGGCGTGGCTCCGGCGCCCGGGGGTGGAGTTGGAGGGTTTAATGGGGTTGGTGGAATTTATGGTGGGATGTATAATCAAGGAAACGTATACGGTTCTGGTGGGTTTCATCACATGGGAATCGGTGGTGGTGCTGCTGAAAAGTCTCATTCTGGTGGAAGCAGCGGTGGTGGAGCCTCTAATATAAGATCTAGGATAAGGAAAGTACACAATGCCTTCCTGCTTAGCTATTTTAAATCTCTGTGGAAAGGTCCTGATGTTCTTCTGCTTGATTGGTTAGCATA 695 0.5295 MADSDNESGGNTNNNANSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKTSMGRQGEKDGGSGGGSSGSGVAPAPGGGVGGFNGVGGIYGGMYNQGNVYGSGGFHHMGIGGGAAEKSHSGGSSGGGASNIRSRIRKVHNAFLLSYFKSLWKGPDVLLLDWLA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00605 231 MobiDBLite consensus disorder prediction 1 24 - -
Bva12g00605 231 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Bva12g00605 231 MobiDBLite consensus disorder prediction 1 25 - -
Bva12g00605 231 MobiDBLite consensus disorder prediction 117 142 - -
Bva12g00605 231 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Bva12g00605 231 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Bva12g00605 231 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Bva12g00605 231 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva12g00605 231 Gene3D Histone, subunit A 15 135 IPR009072 GO:0046982
Bva12g00605 231 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 1 173 - -
Bva12g00605 231 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 173 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva12g00605 231 SUPERFAMILY Histone-fold 25 129 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00605 Bva-Chr12 8034637 8036270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00605 1 128 CCAAT-HAP3 Transcription Factor Family AT4G14540 85.385 3.81e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva12g00605 CBFD_NFYB_HMF 2.5e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00605 K08065 - csv:101219076 250.366