Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00587 ATGATAACTGAATATTACAAGTATGGTAAATGGCATATTGGAATGCATGATATGCTTCAAGAGATGGGTAAGAATATTGTGATGCATGAATCTATTCATGATGCTGGAAAACGTAGTAGATTGTGGTTGCAAGAAGATATTAATCATGTACTAACAAAGAATAAGggAACTGAAGTTATTCAAGGCATAGTTCAAGAGTCACATAATCCATATGAAGCATGGTGGGACCCTATGGCCTTCTTGAAAATGtgtaatcttaaaatattgaagttaGAAAAGTTAGACCTCCCACTTGGTCTCACTTGTCTTTCAGAAGGCTTAAGATATATTGAATGGAAGGATTTTCCATTAGAAGAATTGCCGCTTGGCGTTAATCTTGATGGACTTGTTGACCTTAGAATGCGTCATAGCAAAATGAAGCAACTTTGGCAAGGAACAAAGTATTTTGAAAAGCTGAAGGCCATTGATTTGAAAGATTCAGAAGATTTGATTCGATTCCCTAGGGTTGATGGGGTTCCATATCTTGAACATTTGGTTCTTGAAGGTTGTATAAACCTTATTGAGGTTCACCAATCTGTTGGACTACTAAAGAAGTTAAAGGAGCTGAACTTGGAAGGTTGTGTAAATCTTAAAACGCTTCCAAGCAAGCTGGAAACAGATTCCATGAAGGATTTCATTCTTTCAGGATGTTCCAAAGTTAAGAAGCTTCCAGAATTTGGAGAGAATATGGAATTTCTAACACGGCTTGATCTAAACGATTGCAAAAGTCTTGTTTGCCTGCCTAGATCAATTCATAACTTGAAATCtctcaaaattctcaacaCCTCCGGTTGTTCTAAATTTTCGCAGCTACCAGAGAATTTGGGCGAAAACGAGGCTTGGGAATCACTTGATGTGGACTTAGAGAGACAGAATCCAACTCATCCCAAGTACATGACCTTGCCTCCTCTATCAACCTTTTCACGTTTGGAGGATCTAAACTTAAGTTACATTAATCTTAGGGATGAATCACTTCCTGATGATCTTGGCTCCTTATCAAAATTGATGAGGTTAGATTTAAGTGGCAATAATTTTACCAAGATACCCACTAGGTCAATTGCTAATCTTTCGTGGCTGTATGAGCTGAAGTTGGACAGCTGCCCAATGCTGGAGTCCATACCTGTGCTTCCACCACGTCTACGATCGTTATATGGAAGAAACTGTTCGTCATGGAAACCTTATTCAAATCCATTAgacattttttattggtttgcTTCAAACCAACTGCCTTTTCTGATCATTCCAGGGAGTGAGATCCCACCATGGTTCATCAATCAAAACTACTTTCAACAAGAAATatgttcatattttcattGGGAAGCACTACATGAAGGTGATTATTGGGAACTACTAGGTGAATGTGGCATTTCCCTGGGACTAGATTCTAGCAGGAGGTCGCTATCTCGTTCCATCAAGTCACtgatatcaataataatagaaatccCTGATTATTGTCTTTCAAGCAAGTGGTGGGGCAGTGCTGTGTGCCTTGCCCTAGAAATTGAGTCTCGTGGTTCTTTCGAATGGGCGGGTGCTGGACTTGATTGGATTTGTAAAACTCCTGGAGCTGAATTTCCCATTCCCTCAGGTCTGGTAAGCGGATCCACAATTGATGAGTTCACTGATCCTCACCTGTGTGTTCTATTGTTGAGAGGAAATGATAGAAATATTCAGAGACATCTGCAAGgtgataacaacaaaattcaattGTTATTTCATTCTACACCAATGCCTTGTGATAAGTTGAAGATAAACAAGTGTGGTTGCCGTGTGATTTGTGAACAAGATTTGAATGTGTGGGACAAAGTAATGAGAGGACGAGAACAAAGTGATAACGTTGAGATGGGTTCTAGTTCCAGCTTGACACTGAACAAAGCAAGAATAACAGAACTTGTGGAGGAAGGTGAAAGTACATCAAGTGCTGAAGCAAAAGGTAGAAAACTTGGATA 1988 0.3763 MITEYYKYGKWHIGMHDMLQEMGKNIVMHESIHDAGKRSRLWLQEDINHVLTKNKGTEVIQGIVQESHNPYEAWWDPMAFLKMCNLKILKLEKLDLPLGLTCLSEGLRYIEWKDFPLEELPLGVNLDGLVDLRMRHSKMKQLWQGTKYFEKLKAIDLKDSEDLIRFPRVDGVPYLEHLVLEGCINLIEVHQSVGLLKKLKELNLEGCVNLKTLPSKLETDSMKDFILSGCSKVKKLPEFGENMEFLTRLDLNDCKSLVCLPRSIHNLKSLKILNTSGCSKFSQLPENLGENEAWESLDVDLERQNPTHPKYMTLPPLSTFSRLEDLNLSYINLRDESLPDDLGSLSKLMRLDLSGNNFTKIPTRSIANLSWLYELKLDSCPMLESIPVLPPRLRSLYGRNCSSWKPYSNPLDIFYWFASNQLPFLIIPGSEIPPWFINQNYFQQEICSYFHWEALHEGDYWELLGECGISLGLDSSRRSLSRSIKSLISIIIEIPDYCLSSKWWGSAVCLALEIESRGSFEWAGAGLDWICKTPGAEFPIPSGLVSGSTIDEFTDPHLCVLLLRGNDRNIQRHLQGDNNKIQLLFHSTPMPCDKLKINKCGCRVICEQDLNVWDKVMRGREQSDNVEMGSSSSLTLNKARITELVEEGESTSSAEAKGRKLG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00587 662 Pfam Leucine Rich Repeat 129 147 IPR011713 -
Bva12g00587 662 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 324 413 - -
Bva12g00587 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 324 413 IPR044974 GO:0006952
Bva12g00587 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 221 299 IPR044974 GO:0006952
Bva12g00587 662 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 13 251 - -
Bva12g00587 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 251 IPR044974 GO:0006952
Bva12g00587 662 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 221 299 - -
Bva12g00587 662 SMART LRR_typ_2 345 368 IPR003591 -
Bva12g00587 662 SMART LRR_typ_2 267 291 IPR003591 -
Bva12g00587 662 SMART LRR_typ_2 196 220 IPR003591 -
Bva12g00587 662 Gene3D Ribonuclease Inhibitor 298 425 IPR032675 -
Bva12g00587 662 Gene3D Ribonuclease Inhibitor 67 221 IPR032675 -
Bva12g00587 662 Gene3D Ribonuclease Inhibitor 222 297 IPR032675 -
Bva12g00587 662 SUPERFAMILY L domain-like 15 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00587 Bva-Chr12 7766758 7769521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00587 13 313 WRKY Transcription Factor Family AT4G12020 34.706 4.53e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00587 - - vun:114195147 464.922