Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00585 ATGCTTAAGGAATTAAACTTGAGAAATTGTGTAAATCTTAAGATCCTTCCAAACAAACTAGAAATGACTTcattgaagaattttattctttcaagttgttcaaaacttaaaaggcTTCCAGAATTTGGAGAGTTTATGGAGTTTCTGGAAGAGCTTGATTTATCAAATTGCAGAAGTCTTGTTTCCTTGTCAAGATCCATTGACAAGTTGAAATCTCTTAGAATTCTCTATTTTTCCGGTTGTTCTAAAGCTTTGAGGCAACCAGAGAATTTGAAAGAAGTGCTTCCTTCCATTATGCATTTGAAGTATCTTAAAAGATTTTCTATTCCCTTTGGATGGGTGTTGGGGAGGCATCATATTTCCTCAAGCATCATGGTGCCTCCAATTTCATGCTTTCCCCTTTTAAAGGAGCTAGATCTAAGTTATTGTGATCTCAGCGATGAATCACTTCCTCCTGAGATGGGCTGCTTATCATCTTTGATTGCGTTAGATCTGAGTGGAAACAATTTTACCAAGCTACCAGCTAGTTGCATTGCTAATCTCACTAATCTGCGGTTGCTCACCTTGAATTCCTGTGCTGGCCTTAAGTCGATGCCTAAGCTCCCTCCAAAGATAGAATGGTTTTACCGTTTAAATTGTCCTTCATTGGTAACATGGTCAAATCAAGAATGCCTTTCCGATTTGCAACCCATTCAGACGAGGAGCAGAAGAAGTAATCAAAAGGTGAAAATACCTGAGCAGGACCGGGGTGTTTCTGATTCAAAAATGTCAATAATAGTAGAAATCCCTGATTATTGTCTTTCAAGTGACCAGTGGGATATTGCTGTATGCCTTGTCTTAGAAAATCATGCTCCTACTTCTATTTTGTCCTTACCTATTTATTTGAGCTGGTCTATGGAACTTCTTGGGACTACACACGCAACTTATGGAATTTTGCAGCCGCTCGGCAACTTTGAAGAGTTCCTTGATCCTCAAATTTGTACTTTCCTAATGGGAAACGAATGCATCCGCACAATTATTCGTCCACATCTGAAAGGTGATCAAAACAAACTTCGTTTATCCTGTATGGATGACTACAATTCGAATATTAAGGAGTTGAAGATACGCAAGGAAGATTTGCAAGTGTGGTGGGACAAAGCAAGGAGTGAACGAGAACAAGACAATGGCTTTGGCTTTGATATGCCTTCTACTTCCAGCAGCAGTGATCTTTACAAAGCAACGGTAAGAGAAATTGATGATGAATGGGCAAAGATACCGAATGATGAAGATGGAGaaccatg 1280 0.3789 MLKELNLRNCVNLKILPNKLEMTSLKNFILSSCSKLKRLPEFGEFMEFLEELDLSNCRSLVSLSRSIDKLKSLRILYFSGCSKALRQPENLKEVLPSIMHLKYLKRFSIPFGWVLGRHHISSSIMVPPISCFPLLKELDLSYCDLSDESLPPEMGCLSSLIALDLSGNNFTKLPASCIANLTNLRLLTLNSCAGLKSMPKLPPKIEWFYRLNCPSLVTWSNQECLSDLQPIQTRSRRSNQKVKIPEQDRGVSDSKMSIIVEIPDYCLSSDQWDIAVCLVLENHAPTSILSLPIYLSWSMELLGTTHATYGILQPLGNFEEFLDPQICTFLMGNECIRTIIRPHLKGDQNKLRLSCMDDYNSNIKELKIRKEDLQVWWDKARSEREQDNGFGFDMPSTSSSSDLYKATVREIDDEWAKIPNDEDGEP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00585 426 Pfam Leucine Rich Repeat 160 181 IPR001611 GO:0005515
Bva12g00585 426 Pfam Leucine Rich Repeat 49 70 IPR001611 GO:0005515
Bva12g00585 426 Gene3D Ribonuclease Inhibitor 92 217 IPR032675 -
Bva12g00585 426 SUPERFAMILY L domain-like 2 229 - -
Bva12g00585 426 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Bva12g00585 426 PANTHER - 2 144 - -
Bva12g00585 426 PANTHER - 135 238 - -
Bva12g00585 426 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 2 144 - -
Bva12g00585 426 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 135 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00585 Bva-Chr12 7745085 7746761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00585 5 94 WRKY Transcription Factor Family AT4G12020 34.545 1.11e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00585 - - gmx:100799850 175.252