Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00582 ATGCGTAATGTTAAACTGTTAAAGTTCAAGAATTTAGATCTTCCACTCAGCCTCAAGTGTCTTCCAGAAGGATTAAAATATCTTGAATGGGAGGAATTTCCATTACAAGAATTGCCGCTTGGCGTTCAATTGGATGAAGTTGTCGAACTTAAAATGCATTGTAGCAAGATCAAAACACTTTGGCGTGGAACACAGTCTTTCAAAAAGCTGAAGTTCATTGATTTGAGAGATTCTAAGCATCTAAATCAATTCCCCAGTGTTTTGGAGGCTTCATGTGTTGAACGGTTGGTCCTTGAAGGCTGTATAAACCTTGTAGAAGTTCACAAATCTGTTGGGCAACTCAAGATGCTTAAGGAATTAAACTTGAGAAATTGTGTAAATCTTAAGATCCTTCCAAACAAACTAGAAATGAGTTCACTgaagaattttattctttcaagttgttcaaaacttaaaaggcTTCCGGAATTTGGAGAATGTATGGAGTTTCTAGAAGAGCTTGATTTATCAAATTGCAGAAGTCTTGTTTCCTTCCCAAGATCCATTGACAAGTTGAAATCTCTTAGAATTCTCAATATTTCCGGTTGTTCTAAAGTTTTTAGGCAACcagagaatttgaaaaaatccGAAGATTTGGAGGAGCTTAAACTGAGTAGAACGGCAATGGAAGAAGTGCCTCATTCCATTATGCATTTAAAGTATCTTAAaagattttctcttctctttggaTGGTTGATGGGGAGGCATCATATTTCCTCAAGCATCATGGTGCCTccaatttcattctttcccCTTTTAAAGAAGCTAGATTTAAGTTATTGTGATCTCAGAGATGAATCACTTCCTCCTGAGATGGGCTGCTTATCATCTTTGAGTGAGTTAGATCTGAGTGGTAACAATTTTACTGAGCTACCAGCTAGTTGCATTGCTAATCTCACTAATCTGTATCAGCTCAAGTTGAATTCCTGTGCTAGCCTTAAGTCGATGCCTAAGCTCCCTCCAAATATAGGAAGGTTTTACGGTTTAAATTGTACTTCATTGGTAACATGGTCAGATCAAGAATGCCTTCTCCAATCTTTTGCAACCCACTCAGACGAGGAGCAAGAGGAGAATGTTTTTTCGTACTGTGGAccagttttgttttttccggGGACTGATATTCCACCATGGTTCAGTAATCGGAAGGTGCAAATAGCTGAGCAGGACCGGGGTGTTTCTGATTCAGCCATGTCAATAATTGTAGAAATCCCTGATTGTTGTCTTTCAAGTGAACGGTGGGGTATTGCTGTATGCCTTGTCTTAGAAAATCAAGCTCCTGCTTCTACTTGGTCCTTACCTATTATAGTGAGCTGGGATATGAAACTTCCCGGAGCTACAAACTCAAGATATCCCCCCATCGGTATTTTGTATTTGTGCAACGCCTTAGAGATGTTCCGTCATCCTCACCTCTGTACTTTCCTAATGGGAAACGAATGCCACATAAACATTCGTCCAAATCTGAAACGTGATCAAAACAAATTCCATGTATCATTTAAGGCTTTCGACCAATTGGGAAATAAGTTGAACGTAAGCAAGTGTGGTTGGCGTGTGATACGTGAGGAAGATTTGCAAGTATGGTGGGACAAAGCAAGGAGTGAACAAGAACAAGACAATGGCTTTGGCTTTGATATGCCTTCTACTTCCAGCAGCCGACATCTCTACAAAGCAAGGGTAAGGGAAATTGATGATGGATGCCCAAAGATACCGAATGATGAAGATCGATa 1763 0.3738 MRNVKLLKFKNLDLPLSLKCLPEGLKYLEWEEFPLQELPLGVQLDEVVELKMHCSKIKTLWRGTQSFKKLKFIDLRDSKHLNQFPSVLEASCVERLVLEGCINLVEVHKSVGQLKMLKELNLRNCVNLKILPNKLEMSSLKNFILSSCSKLKRLPEFGECMEFLEELDLSNCRSLVSFPRSIDKLKSLRILNISGCSKVFRQPENLKKSEDLEELKLSRTAMEEVPHSIMHLKYLKRFSLLFGWLMGRHHISSSIMVPPISFFPLLKKLDLSYCDLRDESLPPEMGCLSSLSELDLSGNNFTELPASCIANLTNLYQLKLNSCASLKSMPKLPPNIGRFYGLNCTSLVTWSDQECLLQSFATHSDEEQEENVFSYCGPVLFFPGTDIPPWFSNRKVQIAEQDRGVSDSAMSIIVEIPDCCLSSERWGIAVCLVLENQAPASTWSLPIIVSWDMKLPGATNSRYPPIGILYLCNALEMFRHPHLCTFLMGNECHINIRPNLKRDQNKFHVSFKAFDQLGNKLNVSKCGWRVIREEDLQVWWDKARSEQEQDNGFGFDMPSTSSSRHLYKARVREIDDGCPKIPNDEDR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00582 587 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Bva12g00582 587 Pfam Leucine Rich Repeat 290 312 IPR001611 GO:0005515
Bva12g00582 587 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 167 352 - -
Bva12g00582 587 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 171 - -
Bva12g00582 587 Pfam Leucine Rich Repeat 48 65 IPR011713 -
Bva12g00582 587 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 352 IPR044974 GO:0006952
Bva12g00582 587 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 171 IPR044974 GO:0006952
Bva12g00582 587 Gene3D Ribonuclease Inhibitor 208 364 IPR032675 -
Bva12g00582 587 Gene3D Ribonuclease Inhibitor 2 136 IPR032675 -
Bva12g00582 587 Gene3D Ribonuclease Inhibitor 137 207 IPR032675 -
Bva12g00582 587 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Bva12g00582 587 SMART LRR_typ_2 288 311 IPR003591 -
Bva12g00582 587 SUPERFAMILY L domain-like 16 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00582 Bva-Chr12 7710418 7712601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00582 1 242 WRKY Transcription Factor Family AT4G12020 35.612 6.26e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00582 - - vun:114195147 403.675