Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00581 ATGCGTAATGTTAAACTGTTAATGTTCAAGAATTTGGATCTCCCACTCAGCCTCAATTGTCTTCCAGAAGGATTAAAATATCTTGAATGGGAGGAATTTCCACTACAAGAATTGCCGCTGGGCGTTCAATTGGATGAAGTTGTTGAACTTAAAATGCATTGTAGCAAGATTAAGACACTTTGGCGTGGAACACAATCTTTCAGAAAGCTGAAGTTCATTGATTTGAGAGATTCTAAGTATCTAAATCAATTCCCCAGTGTTTTGGAGGCTTCATGTGTTAGCTGTATAAACCTTGTAGAAGTTCACAAATCTGTTGGGCAACTCAAGATGCTTAAGGAATTAAACTTGAGGAATtgtgtaaattttaagatCCTTCCAAACAAACTAGAAATGAGTTCACTgaagaattttattctttcaagttgttcaaaacttaaaaggcTTCCGGAATTTGGAGAGTGTATGGACTTTCTAGAAGAGCTTGATTTATCAAATTGCAGAAGTCTTGTTCCCTTTCCAAGATCCATTGACAAGTTGAAATCTCTTAGAATTCTCAATATTTCCGGTTGTTCTAAAGCTCTGAGGCAACcagagaatttgaaaaaatccGAAGATTTGGAGGAGCTTAAACTGAGTAGAACGTCAATAAAAGAAGTGCTTCCTTCCATTATGCATTTGAAGTATCTTAAAAGATTTTCTATTCTCTTTGGATGGATGTTGGGGAGGCATCATATTTCCTCAAGCATCATGGTGCCTCCAATTTCATGCTTCCCCTTTTTAAAGAAGCTAGATCTAAGTTATTGTGATCTCAGCGATGAATCATTTCCTCCTGAGATGGGCTGCTTATCATCTTTGATTGAGTTAGATCTGAGTGGAAACAATTTTACTGAGCTACCAGCTAGTTGCATTGCTAATCTCGCTAATCTGCGTCTGCTCAACTTGAATTACTGTGCTGGCCTTAACTCGATGCCTAAGCTCcctctaaatataaaatggtttTCCGGTTTAAATTGTCCTTCATTGGTAACATGGTCAGATCAAGAATGCCTTCCCGATTTTTTTGAAATCCACTCAGACGAGGAGCAGAAGAAGaTTGATTTTTCGTCCTTTcgaccattttttatttttccggGGACTGATATTCCACCATGGTTCAGTAATCAAATGGTGAAAATACCTGAGCAGGACCGGGGTGTTTCTGATTCAGATATGTCAATAATAGTAGAAATCCCTGATTATAGTCTTTCAAGTGAACGGTGGGGTATTGCTGTATGCCTTGTCTTAGAAAATCATGCTATTATTTCTGCTTCTATTTGGTCCTTATCTTTTCATGTGGGCTTGGATATGAAACTTCCCGGAACTACACACACCAGGGGTATTATGTATCTTAGCGACGTCTTAGAAGATTTCCGTCATCCTCACCTTTGTACTTTCCTGATGGAAGACGAATACATCCTCCACACAGACATTCGTCCATATCTGAAAGGTGATCAAAACCAATTTCATGTATCATTTAAGGCTCGCGGCAATTTGAGGATTCGTAAGTTTTCAATACGAAAGTGTGGTTGGCGTGTGATACGCAAGAAAGATTTGCAAGTGTGGTGGGACAAAGCAAGGAGTGAACGAGAACAAGACAATGGCTTTGGCTTTGATATGCCTTCTACTTCCAGCAGTAGTGATCTCTACAAAGCAAGGGTAAGAGAAATTGATGATGAATGGGCAAAGATACCAAATGATGAAGATCGAGaactatg 1754 0.3672 MRNVKLLMFKNLDLPLSLNCLPEGLKYLEWEEFPLQELPLGVQLDEVVELKMHCSKIKTLWRGTQSFRKLKFIDLRDSKYLNQFPSVLEASCVSCINLVEVHKSVGQLKMLKELNLRNCVNFKILPNKLEMSSLKNFILSSCSKLKRLPEFGECMDFLEELDLSNCRSLVPFPRSIDKLKSLRILNISGCSKALRQPENLKKSEDLEELKLSRTSIKEVLPSIMHLKYLKRFSILFGWMLGRHHISSSIMVPPISCFPFLKKLDLSYCDLSDESFPPEMGCLSSLIELDLSGNNFTELPASCIANLANLRLLNLNYCAGLNSMPKLPLNIKWFSGLNCPSLVTWSDQECLPDFFEIHSDEEQKKIDFSSFRPFFIFPGTDIPPWFSNQMVKIPEQDRGVSDSDMSIIVEIPDYSLSSERWGIAVCLVLENHAIISASIWSLSFHVGLDMKLPGTTHTRGIMYLSDVLEDFRHPHLCTFLMEDEYILHTDIRPYLKGDQNQFHVSFKARGNLRIRKFSIRKCGWRVIRKKDLQVWWDKARSEREQDNGFGFDMPSTSSSSDLYKARVREIDDEWAKIPNDEDREL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00581 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 172 332 - -
Bva12g00581 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 9 170 - -
Bva12g00581 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 103 237 - -
Bva12g00581 584 SUPERFAMILY L domain-like 16 340 - -
Bva12g00581 584 Pfam Leucine Rich Repeat 158 179 IPR001611 GO:0005515
Bva12g00581 584 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Bva12g00581 584 Pfam Leucine Rich Repeat 48 65 IPR011713 -
Bva12g00581 584 Gene3D Ribonuclease Inhibitor 3 237 IPR032675 -
Bva12g00581 584 Gene3D Ribonuclease Inhibitor 238 345 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00581 Bva-Chr12 7678301 7680478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00581 11 229 WRKY Transcription Factor Family AT4G12020 34.387 1.85e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00581 - - vun:114195147 368.237