Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00565 ATGTTATTATCTGGTTTCTTGTCCTTGTTCGCTGTAGAAAACATGGCAGAAGAGGAGACAAAGcctctaaattatatttctgaGGTAGttttgaagaagagaaaaagcaaTGAAGCACGGGCATTGGGGACAAAGGAACAATTTGAGCTAGCCAACTTCAAAAGCAATAAGAGCAATGACTATGCCAAAAAGCTTGAGGATTTTATTATAGAGTACCGCAGCAGGGAGCTTGACCTGATAAGAATGAAACTGAGGTCCAAGAGGAAACGATCTGCCTTATTAACACCAAAGTCAAAAAAAAATGGCATGCATCCGAAAACTCGAAAGGTGTTATACAGCTTGGGATTGAGAAGAATATTAAGTGTTGTCTTAGTGAAGGCGACTGAAGGAATATTGGAGAAGCTGGAGAGGGTCGAACCATATGTTACCAATGAAGGGACCAACATTGCAATTAAACTGAATGCAATTTTCTTGACCATAGATGGCAAGGGTTGTTTTATTCACCAGCCATGTAAAGGAGCTAATTTACAAAAGGGCACATGCAAGAACATAGACAAGCAGAAAGTCCCTCCGACAGACAATAACCTTATTGAACAGGTATTGGGGAAACTGGGTATTGCATGTTTAGAAGACATGGTGCATGAAATAGCTAATGTTGGTCCACACTTTAAGGAAATTGTTAGATTTTTGTGGCCCTTTCAACTCAACAAACCAACAGAAGGATA 725 0.3807 MLLSGFLSLFAVENMAEEETKPLNYISEVVLKKRKSNEARALGTKEQFELANFKSNKSNDYAKKLEDFIIEYRSRELDLIRMKLRSKRKRSALLTPKSKKNGMHPKTRKVLYSLGLRRILSVVLVKATEGILEKLERVEPYVTNEGTNIAIKLNAIFLTIDGKGCFIHQPCKGANLQKGTCKNIDKQKVPPTDNNLIEQVLGKLGIACLEDMVHEIANVGPHFKEIVRFLWPFQLNKPTEG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00565 241 PANTHER 60S RIBOSOMAL PROTEIN L7-1 17 148 - -
Bva12g00565 241 PANTHER 60S RIBOSOMAL PROTEIN L7-1 178 240 - -
Bva12g00565 241 SUPERFAMILY Ribosomal protein L30p/L7e 187 241 IPR036919 -
Bva12g00565 241 SUPERFAMILY Ribosomal protein L30p/L7e 100 143 IPR036919 -
Bva12g00565 241 Pfam Ribosomal protein L30p/L7e 100 142 IPR016082 -
Bva12g00565 241 Gene3D - 95 241 IPR036919 -
Bva12g00565 241 PANTHER 60S RIBOSOMAL PROTEIN L7 17 148 IPR039699 -
Bva12g00565 241 PANTHER 60S RIBOSOMAL PROTEIN L7 178 240 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00565 Bva-Chr12 7545311 7547632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00565 15 239 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 42.553 2.09e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00565 K02937 - csv:101215064 234.572