Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00561 ATGAAGTCATCAAGTTCCACCCTTTGCATTCTCCTCCAAatcattctcttctctctGTTGCAAATACCCATCTTTGCTGTGAAAAAGTCTTATGTGGTGTACCTGGGAGCCCACAACCACCACCCAGAATTGTCTTCCATTGATTTCCACCAAGTCACTGATTCCCACTATGAGTTTCTTGGATCTTTCTTAGGGagCTCTGAAAGAGCCAAAGATTCTATCTTTTACTCTTACACAAGGCACATCAATGGTTTTGCTGCAAATTtggaagaagcagaagcagctGAGATAGCCAAGCACCCCAAAGTGATCTCAGTTTTCTTGAATAGAGGGAGAAAATTGCACACAACCAGATCGTGGGATTTCATGGGGCTGGAGAATAATGGGGTAACCCCATCTAGCTCACTGTGGAAGAAAGCCAACTATGGTGAAGGTGTGATCATAGGAAACCTCGATACAGGCGTTTGGCCAGAATCCAAGAGCTTTAGTGATGAAGGGTTGGGACCAATTCCAGCAAAGTGGAAAGGAATCTGCCAAAATGAAACTGCACCTGGTTTTCACTGCAACAGGAAGCTACTTGGAGCAAGGTACTTCAACAAAGGCTATGCTTCTGTTGCTGGTCCACTCAATGCCTCCTTTGACTCACCACGAGACAATGAAGGCCATGGCTCTCACACCCTCTCAACAGCTGCCGGCAACATCGTACCTGGGGTGAGTGTCTTCGGCCAAGGTTATGGAGCAGCCAAGGGCGGCTCGCCAAGGGCCCGGGTGGCAGCGTACAAGGTCTGTTGGCCGCCGATCAACGAAGAAGAGTGCTTCGATGCAGATATCTTGGCAGGATTCGACATGGCCATCCATGATGGTGTTGATGTTCTGTCAGTGTCACTTGGTGGCAACCCTTCTGCTCTTTTCAATGATAGTGTGGCCATTGGCTCCTTCCATGCTGCCAAGCATGGCATTGTGGTGGTTTGCTCAGCTGGCAATAGTGGCCCAAAAGATGGTTCTGTGGAGAACCTTGCACCATGGCATCTCACAGTTGGAGCCAGCACAATGGACAGAGAGTTCCCCACTTATGTTATCCTTGGCAACAAGATTAGCCTCAAGGGAGAAAGCTTATCAGATGCAAAATTGCCACACAAATCCTACCCACTTATTACTGCTGTAGAAGCTAAAGCAGCTAATGCAACAGTTGCAGACGCCATTCTCTGCCAGAATGGAACCTTAGATCTAGAAAAGGTGAAGGGGAAGATTGTGGTGTGCCTCCGCGGCGAAAACGCGAGAGTGGACAAGGGACAGAATGCTTTACTTGCTGGTGCTGTGGGAATGGTTCTTGCCAATGATGCCGCTAGTGGAAATGAAATCATAGCTGATCCTCATGTTCTTCCTGCTTCTCATATCAATTACTCTAATGGTGTTTCTTTGTTCCAGTACATCAACTCAACCAAGTTCCCAGTGGCATACATTACACATCCAACAACTAAATTGAATACAAGGCCAGCCCCCTTAATGGCTGCTTTTTCATCAAAAGGGCCTAATCCTATTATACCAGAGATTTTAAAGCCTGATATAACTGCACCAGGAGTGTCAGTTATAGCAGCTTACACAGAAGCTCAAGGGCCGACTAATCAACCATTTGACAGACGCCGCGTGCCATTTAACTCAGTCTCCGGCACTTCAATGTCATGCCCTCATGTTTCAGGCATTGCTGGCCTGCTGAAAGCACTTCATCCTTCATGGAGCCCTTCTGCTATTAAATCTGCAATCATGACCACTGCTACAATGTATGATAATGAGATGGAGCTACTGCTAAATGCTTCTGACATCCAAGCCACACCATTCAGCTATGGAGCTGGCCATATTCAACCAAACAAGGCAATGGATCCTGGCCTTGTTTATGATGCAACAATTGACGATTACCTCAACGTCTTATGTACATTGGGCTACAATCAAACACAAATCTTAGAGTTTACAGAAAGCCCTTACAGATGCAACAAGAATTTCAACCTCCTCAACCTCAACCATCCTTCAATCAcagtcccaaatctctctggGACAGTTCAAATCACAAGAACCCTAAAAAATGTTGGTGCCCCGGCAACATACACTGCTTATGTCCAAAACCCTTTTGGAATCGCCATTTCTATCAAGCCCAAGATCTTGAATTTCAGAAAAGCTGGAGAAGAAAAGAGCTTCAAAGTCATAATCAAAGTCAAGGGAGGCATAAAAGTAAACGACTATGTGTTTGGGAAGCTGATATGGTCAGATGGGAAGCATAGGGTAGGGAGTCCCATTGTGGTGAGAGCTGTCTA 2309 0.4495 MKSSSSTLCILLQIILFSLLQIPIFAVKKSYVVYLGAHNHHPELSSIDFHQVTDSHYEFLGSFLGSSERAKDSIFYSYTRHINGFAANLEEAEAAEIAKHPKVISVFLNRGRKLHTTRSWDFMGLENNGVTPSSSLWKKANYGEGVIIGNLDTGVWPESKSFSDEGLGPIPAKWKGICQNETAPGFHCNRKLLGARYFNKGYASVAGPLNASFDSPRDNEGHGSHTLSTAAGNIVPGVSVFGQGYGAAKGGSPRARVAAYKVCWPPINEEECFDADILAGFDMAIHDGVDVLSVSLGGNPSALFNDSVAIGSFHAAKHGIVVVCSAGNSGPKDGSVENLAPWHLTVGASTMDREFPTYVILGNKISLKGESLSDAKLPHKSYPLITAVEAKAANATVADAILCQNGTLDLEKVKGKIVVCLRGENARVDKGQNALLAGAVGMVLANDAASGNEIIADPHVLPASHINYSNGVSLFQYINSTKFPVAYITHPTTKLNTRPAPLMAAFSSKGPNPIIPEILKPDITAPGVSVIAAYTEAQGPTNQPFDRRRVPFNSVSGTSMSCPHVSGIAGLLKALHPSWSPSAIKSAIMTTATMYDNEMELLLNASDIQATPFSYGAGHIQPNKAMDPGLVYDATIDDYLNVLCTLGYNQTQILEFTESPYRCNKNFNLLNLNHPSITVPNLSGTVQITRTLKNVGAPATYTAYVQNPFGIAISIKPKILNFRKAGEEKSFKVIIKVKGGIKVNDYVFGKLIWSDGKHRVGSPIVVRAV 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00561 769 Gene3D - 352 495 - -
Bva12g00561 769 SUPERFAMILY PA domain 398 483 IPR046450 -
Bva12g00561 769 SUPERFAMILY Subtilisin-like 114 630 IPR036852 GO:0004252|GO:0006508
Bva12g00561 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Bva12g00561 769 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Bva12g00561 769 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Bva12g00561 769 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Bva12g00561 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 115 IPR037045 -
Bva12g00561 769 CDD Peptidases_S8_3 113 593 IPR034197 -
Bva12g00561 769 CDD PA_subtilisin_like 358 488 - -
Bva12g00561 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 15 768 - -
Bva12g00561 769 ProSiteProfiles Serine proteases, subtilase domain profile. 119 626 - -
Bva12g00561 769 PANTHER PEPTIDASE S8 15 768 - -
Bva12g00561 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Bva12g00561 769 Pfam Subtilase family 143 616 IPR000209 GO:0006508|GO:0008236
Bva12g00561 769 Pfam PA domain 401 473 IPR003137 -
Bva12g00561 769 Gene3D - 643 769 - -
Bva12g00561 769 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Bva12g00561 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00561 Bva-Chr12 7509486 7519683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00561 30 767 Subtilisin-like Serine Gene Family AT2G04160 63.698 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00561 - - gmx:100794807 1191.79