Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00555 ATGGGGGATGATTCTGATGTCCAGAAGATCAGAAACATATGCATTTTGGCACATGTTGATCATGGCAAGACCACACTTGCTGATCACTTGATAGCTGCCTCTGGTGGTGGTGTGCTTCACCCAAAATTGGCAGGACGCATTAGGTTCATGGATTATTTAGATGAAGAACAAAGGCGTGCAATTACTATGAAGAGCTCTTCCATTGCTCTTCACTATAAGGACTATTCTGTTAATCTCATTGATTCGCCTGGTCATATGGACTTCTGTAGTGAAGTATCTACAGCTGCTAGATTAAGTGATGGTGCATTGATTTTGGTTGATGCTGTTGAGGGTGTGCACATTCAAACCCATGCTGTGTTGCGGCAATGTTGGATTGAGAAGCTCACCCCATGCTTGGTTCTTAACAAGATTGATAGGTTGATTAGTGAATTGAAGTTGAGTCCAATGGAAGCGTATACTAGGTTGTTGAGGATAGTTCAACATGTCAATGGGATTGTCAGTGCATATAAGTCAGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCGGGTGACATTGTTGGTGATGAAAGTGCCGAATTTATAgaggatgatgaagaagatacCTTTCAACCTCAGAAAGGGAATGTGGCATTTGTATGTGCACTTGATGGTTGGGGATTTAGAGTACATGAGTTTGCGGAATTCTATGCGTCAAAACTTGGGGCGAGTGCTGCTGCATTGCAGAAAGCTCTATGGGGTCCTCGGTATTTCAATCCAAAGACTAAAATGATTGTTGGGAAGAAAGGCATAGGTGGAGGAGGTAAGGCTAGGCCTATGTTTGTTCAGTTTGTGCTTGAACCATTATGGCAAGTATACCAAGGAGCTTTAGAGGATGATGGGGACAAAGGAATGCTGGAGAAAGTCATTaagtcttttaatttgtctataCCTTCTCGTGAACTCCAGAATAAGGACCCTAAGATTGTGCTTCAAGCTGTCATGAGCCGTTGGCTTCCTCTATCAGATGCAATTTTGTCAATGGTGGTTAAATGCATGCCAGACCCGATTGCAGCACAATCATTTCGTGTCTCACGGCTTCTTCCAAAGAAAGAGGTTCTTGACAATTTGATAGATCATGATGTGTTAGCAGAGGCAGAGCTTATAAGAAAGTCAGTAGAGGCATGTGATTTGAGGCCTGAAGCTCCTTGTGTTGCTTTTGTGTCAAAGATGTTTGCTGTCCATGTTAAAATGCTTCCCCAAAGGGGTTCACATGGGGAGATCTTGAATAATTATAGTGACGAAGGAGAGGGTGACTCAGATGAGTGCTTCCTGGCGTTTGCTAGGATCTTTAGTGGGGTTTTGTCTGCAGGACAGAGAGTTTTTGTCCTGTCAGCTTTGTATAATCCTCTAAAAGGGGAATCAATGCAAAAACATATGCAGGAGGCTAATATACAATCTTTGTATCTGATGATGGGCCAAGGCTTGAAAGTAGTGACATCTGCAAAAGCAGGAAATATTGTTGCTATCCGAGGTCTTGGCCAGCATATATTGAAAAGTGCTACGCTTTCTTCTTCCAGGAACTGTTGGCCATTCTCCAGCATGGCATTTCAAGTTTCCCCTACTCTGAGAGTTGCAATTGAGCCAACTGATCCTGCAGATACGGGTGCACTATTGCAAGGCTTGAGGCTTCTGAATCGAGCAGATCCATTTGTTGAGGTAACTGTTTCTGCAAGAGGTGAGCATGTCCTTGCTGCAGCAGGTGAAGTTCATCTTGAAAGATGCATAAAGGATTTGAAGGAGAGATTTGCAAAAGTAAGCTTGGAAGTGTCTCCTCCTCTTGTGTCCTACAAAGAGACCATTGAGGGAGAGGTGACGAACATGctggaaaatttgaaaagactCAGTAGCAGTTCTGAATATATTGAGAAAACAACACCAAATGGAAGATGTGTTCTCCACGTGAAGGTTATGAAGCTTCCACCTTCTCTAACTAAGGTGCTTTATGAAAGTTCTGATTTGCTCGGGGATGTTATTGGAATAAGGTCAGGGCAGACagtaaaaaatttggaaaccCATAGTTCAAGCATTCTGGAGAATTATAGCCCAACTGAAGTGATGAGAAAACGCATAATGGATGCTGTGGAGAGTGATATTTTGAGCAGGGACGAGAATGACAAGGATTACATTGACAAATGTAAGGTAAAATGGCAAAAACTTCTGAGGAGGATATGGACACTTGGACCCGGGCAGATTGGTCCCAACATTCTATTTACTCCTGATATTAAAGCAGAAAGTACCAATAGTTCTGTTCTAATACGTGGTTGCCCTCATGTGTCTGAGAGGCTAGGCTATGTGGGTGATTCTACTGCTGCTAACTCCGTTGGTGAAACATCTTCCAATCCAAGTGAAGCCTTGTGCATGGAAGCTGAGCGTCTTGAGAGTAGTGTTATATCTGGTTTTCAACTAGCCACTTCAGCTGGACCATTATGTGATGAACCTATGTGGGGTTTGGCATTTATAATTGAGGCATACATTTCTCCTTCTAGAGGTCAGTATGACGAGTCTGAAACACACCAAAAATCTGAGCAGTATGGGGTCTTTGCAGGACAGGTTATTACAGCCGTCAAAGATGCCTGTAGAGCAGCTGTGCTTCAAAGGAAGCCACGGCTTGTTGAAGCAATGTACTTTTGTGAGTTGAATACCTCTATGGAATATTTGGGCCCCATGTATGCTGTACTTGCTCGAAGACGGGCCCGTGTTTTGAAGGAAGAGATGCAAGAAGGTTCCCCTCTCTTCACTGTGCATGCATATGTTCCAGTTTCTGAGAGTTTTGGTTTTGCTGATGAACTTAGAAGGTGGACTTCTGGTGCTGCAAGTGCTCTTCTTGTCCTTAGTCACTGGGAAACACTATCTGAGGATCCATTCTTTGTACCTAAAACAGAAGAGGAACTCGAAGAGTTTGGAGATGGTTCAAGTGTGCTTCATAATACAGCAAGAAAGCTAATTGATGCTGTCAGACGGCGTAAGGGCCTTCCTGTGGAGGAAAAAGTAGTCCAGCATGGAACAAAGCAACGCACACTGGCTCGTAAGGTCTG 3086 0.4258 MGDDSDVQKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALHYKDYSVNLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLTPCLVLNKIDRLISELKLSPMEAYTRLLRIVQHVNGIVSAYKSEKYLSDVDSILAGPSGDIVGDESAEFIEDDEEDTFQPQKGNVAFVCALDGWGFRVHEFAEFYASKLGASAAALQKALWGPRYFNPKTKMIVGKKGIGGGGKARPMFVQFVLEPLWQVYQGALEDDGDKGMLEKVIKSFNLSIPSRELQNKDPKIVLQAVMSRWLPLSDAILSMVVKCMPDPIAAQSFRVSRLLPKKEVLDNLIDHDVLAEAELIRKSVEACDLRPEAPCVAFVSKMFAVHVKMLPQRGSHGEILNNYSDEGEGDSDECFLAFARIFSGVLSAGQRVFVLSALYNPLKGESMQKHMQEANIQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSRNCWPFSSMAFQVSPTLRVAIEPTDPADTGALLQGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEVTNMLENLKRLSSSSEYIEKTTPNGRCVLHVKVMKLPPSLTKVLYESSDLLGDVIGIRSGQTVKNLETHSSSILENYSPTEVMRKRIMDAVESDILSRDENDKDYIDKCKVKWQKLLRRIWTLGPGQIGPNILFTPDIKAESTNSSVLIRGCPHVSERLGYVGDSTAANSVGETSSNPSEALCMEAERLESSVISGFQLATSAGPLCDEPMWGLAFIIEAYISPSRGQYDESETHQKSEQYGVFAGQVITAVKDACRAAVLQRKPRLVEAMYFCELNTSMEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWETLSEDPFFVPKTEEELEEFGDGSSVLHNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00555 1028 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 5 1027 - -
Bva12g00555 1028 Pfam Elongation factor G C-terminus 887 971 IPR000640 -
Bva12g00555 1028 Gene3D - 632 883 IPR014721 -
Bva12g00555 1028 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 242 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 SUPERFAMILY Translation proteins 390 531 IPR009000 -
Bva12g00555 1028 SMART EFG_C_a 886 975 IPR000640 -
Bva12g00555 1028 CDD aeEF2_snRNP_like_IV 608 893 - -
Bva12g00555 1028 CDD EF2 11 234 - -
Bva12g00555 1028 SUPERFAMILY EF-G C-terminal domain-like 534 609 IPR035647 -
Bva12g00555 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 350 IPR027417 -
Bva12g00555 1028 Gene3D Elongation Factor G (Translational Gtpase), domain 3 536 612 - -
Bva12g00555 1028 Pfam Elongation factor Tu domain 2 441 519 IPR004161 GO:0005525
Bva12g00555 1028 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Bva12g00555 1028 PANTHER - 5 1027 - -
Bva12g00555 1028 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 CDD EF2_II 399 522 - -
Bva12g00555 1028 CDD eEF2_snRNP_like_C 889 967 - -
Bva12g00555 1028 SUPERFAMILY EF-G C-terminal domain-like 889 989 IPR035647 -
Bva12g00555 1028 SUPERFAMILY Ribosomal protein S5 domain 2-like 611 888 IPR020568 -
Bva12g00555 1028 Gene3D - 3 205 IPR027417 -
Bva12g00555 1028 TIGRFAM small_GTP: small GTP-binding protein domain 9 140 IPR005225 GO:0005525
Bva12g00555 1028 Pfam Elongation factor Tu GTP binding domain 9 349 IPR000795 GO:0003924|GO:0005525
Bva12g00555 1028 Gene3D Translation factors 352 534 - -
Bva12g00555 1028 Gene3D - 885 1019 - -
Bva12g00555 1028 CDD EF2_snRNP_III 537 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00555 Bva-Chr12 7472958 7476767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00555 3 1028 Eukaryotic Initiation Factors Gene Family AT3G22980 72.718 0.0 1525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00555 K14536 - zju:107410537 1639.78