Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00552 ATGGCAAATATCTCTACCTCAGACCCACTGAActgggcggcggcggcggagTCACTCAAGGGCAGCCACTTTGATGAAGTCAAACGCATGGCGGCGGAGTACCGGAATCCGGTCATCCATCTCGGCGGCGAGGCGCTGACGATCTCTCAGGTGGCTGCCGTTGCAAAGCGTGACACACAAGTTAGAGTTGAGCTGTCGGAATCTGCAAGAGCAAGGGTTGAGGCTAGCGTTGAGTGGATATTGGAGAGCATTGAGAAAGGCACTGCTATTTATGGAGTCACCACTGGCTTTGGTGCTGCCTCACATAGAAGAACCAATCAAAGTCTTGCCCTTCAAAAGGAGATGGCTAGATTTTTGAACTCTGGAATGTTTGGTAAGGGATCAGAGTTATCCCACACTCTTTCTCAATCTGCAACAAGAGCAGCCATGCTTGTGAGAGCAAACACCCTTCTTCAAGGCTACTCAGGCATCAGATTTGAGATCTTAGAAGCCATAACAAAGCTCCTCAACAGCAATGTCACCCCCTTATTGCCCTTACGTGGGACACTCACTGCTTCTGGCGATCTCATTCCTCTTTCCTACATTGTTGCATTGCTAATCGGTCGGCAAAACTCGAAAGCCATTGGACCCTCTGGAGATACCTTAAGTCCCAAGCAAGCTTTCCATTTAGCTGGAATCAATTCTGGGTTCTTTGAATTGCAGCCTAAAGAAGGCCTTGCTCTTGTAAATGGCACTGTTGTTGGATCTGGGTTAGCTTCTATTGTTCTTTTCGAGTCGAATATCTTAGCATTGCTGTCAGAAATTCTATCAGCAATTTTCTGTGAAGTGATGCAGGGAAAGCCAGACTTCACAGACCATCTGATTCATAAGCTGAAGCATCATCCTGGTCAAATTGAAGCTGCTGCTGTTATAGAACACATTTTGGAAGGTAGCTTGTGTGTCAAGGAAGCTAAGAAGGTAGATCCAGCACTGCAGAAGCCTAAGAAAGATCGTTATGCTCTTGTAACTTGCCCTCAATGGCTTGGACCACAGATTGAAGTCATTCGATTTTCGACTAAATCGATGGAAAGGGAGATAAACTCAGTGAATGATAATCCTCTTATTGATGTTTCAAGGGATAAGGTTCTAAATGGCGGGAACTTCCAAGGCACACCAATTGGAGTTTCAATGGACAACACACGTTTAGCCATTGCTTCAATTGGGAAACTTGTCTTTGCACAATTCACTGAGCTTGTGAATGATTCTTACAATAATGGGTTGCCATCAAATCTCTCTGCTGGTAGAAACCCAAGTTTGGATTATGGATTCAAAGCAGCTGAAGTTGCCATGGCATCTTATTGTTCAGAGCTTCAATATCTGGCAAACCCAGTAACGAGCCATGTGCAGAGTTGTGAGCAGCACAACCAAGATGTGAACTCTCTGGGTTTGATTTCTGCAAGAAAAACTGAGGAAGCTGTTGAAATCTTGAAACTCATGTGTTCTACATTTCTTGTTGCTCTATGCCAAGCAATTGATTTGAGGCATTTAGGGGAAAATTTGAAGAGTGCAGTGAAGGAAACTGTGAGCCAAGTTGCAAAGAAGACTCTAATCAAAggagagaatgaagaaaataacccATTTAGATTTTGTGAAGAAGAATTGGtgaaaattgttgaaaaagaatatgtgTTTTCCTACATTGATGATCCTTTCAATGTTGGATACCCATTGATGCCAAAACTGAAGCAAGTGCTTTATGAGCATGCACATAGGAATTCCATAAAGGAGAAGAATATTGGGAGCAGTTCAATTTTTGAGAAGATTGAAGCTTTTGAGGAGGAATTGAAGTCTCTCTTGCCAAAGGAAGTTGAAAGTGCAAGGGTGGGTTTTGAGAAGGGCAATTCAGTAAttgcaaacaaaattaaggaGTGTAGGTCTTATCCACTATACAGATTTGTGAGGGAGGCGTTGGGAACTGAATTGCTGACTGGAGAAAAGATCAATTCACCAGATGAGGATTTTGATAAAGTGTTTGAAGCAATGTGTGAAGGAAAGATTATTGATCCAATTCTTGAATGCCTTGCAGATTGGAATGGGGTCCCCTGCCTAATTTA 2093 0.4142 MANISTSDPLNWAAAAESLKGSHFDEVKRMAAEYRNPVIHLGGEALTISQVAAVAKRDTQVRVELSESARARVEASVEWILESIEKGTAIYGVTTGFGAASHRRTNQSLALQKEMARFLNSGMFGKGSELSHTLSQSATRAAMLVRANTLLQGYSGIRFEILEAITKLLNSNVTPLLPLRGTLTASGDLIPLSYIVALLIGRQNSKAIGPSGDTLSPKQAFHLAGINSGFFELQPKEGLALVNGTVVGSGLASIVLFESNILALLSEILSAIFCEVMQGKPDFTDHLIHKLKHHPGQIEAAAVIEHILEGSLCVKEAKKVDPALQKPKKDRYALVTCPQWLGPQIEVIRFSTKSMEREINSVNDNPLIDVSRDKVLNGGNFQGTPIGVSMDNTRLAIASIGKLVFAQFTELVNDSYNNGLPSNLSAGRNPSLDYGFKAAEVAMASYCSELQYLANPVTSHVQSCEQHNQDVNSLGLISARKTEEAVEILKLMCSTFLVALCQAIDLRHLGENLKSAVKETVSQVAKKTLIKGENEENNPFRFCEEELVKIVEKEYVFSYIDDPFNVGYPLMPKLKQVLYEHAHRNSIKEKNIGSSSIFEKIEAFEEELKSLLPKEVESARVGFEKGNSVIANKIKECRSYPLYRFVREALGTELLTGEKINSPDEDFDKVFEAMCEGKIIDPILECLADWNGVPCLI 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00552 697 SUPERFAMILY L-aspartase-like 8 695 IPR008948 GO:0003824
Bva12g00552 697 PANTHER PHENYLALANINE AMMONIA-LYASE 5 695 - -
Bva12g00552 697 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 8 687 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bva12g00552 697 Gene3D - 510 632 IPR023144 -
Bva12g00552 697 CDD PAL-HAL 44 507 IPR001106 -
Bva12g00552 697 Gene3D Fumarase/aspartase (Central domain) 247 692 - -
Bva12g00552 697 PANTHER HISTIDINE AMMONIA-LYASE 5 695 IPR001106 -
Bva12g00552 697 Pfam Aromatic amino acid lyase 46 520 IPR001106 -
Bva12g00552 697 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 181 197 IPR022313 GO:0016841
Bva12g00552 697 Gene3D - 1 245 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00552 Bva-Chr12 7441844 7444541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00552 4 697 Monolignol Biosynthesis Gene Families AT2G37040 72.023 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00552 K10775 - gmx:100787872 1048.5