Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00550 ATGGCTGCACAAGCTCTGGTATCTTCATCATCTCTCACAGCCTCAGTGGAGTCTGCGAGACAGATTCTAGGAGCAAGACCAGTTCAATCTGCAGTTGGGTACTCGAAAAGAGCTTCCTTTATTGTCAAGGCTGCTTCTACTCCCCCAGTGAAGCAAGGAGCAGACAGACAGTTGTGGTTTGCCTCAAAACAGAGTCTATCTTACTTGGATGGGAGCCTCCCTGGTGACTACGGATTTGACCCTCTTGGGCTTTCAGACCCAGAAGGAACAGGAGGCTTCATTGAGCCAAAATGGTTGGCATACGGCGAGGTCATCAACGGGCGTTACGCAATGATGGGTGCAGTTGGTGCCATTGCACCTGAGATTCTTGGAAAGGCCGGTCTGATTCCTCAGGAAACAGCCCTACCATGGTTCAAAACTGGTGTAATCCCACCTGCAGGAACCTACAACTACTGGGCAGACCCATACACACTCTTTGTCTTTGAAATGGCTCTGATGGGATTTGCAGAACACAGAAGATTCCAAGACTGGTACAACCCAGGTTCCATGGGTAAGCAATACTTTCTGGGGCTGGAGAAAGCTTTCAGTGGCTCTGGTGAACCAGCATACCCAGGAGGACCTCTCTTCAACCCTCTTGGCTTTGGGAAAGATGAGAAATCCCTCAAGGACCTCAAGCTCAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTATTCAAGCTCTTGTGACAGGAGTTGGACCATACCAAAACCTGCTTGATCACTTGGCTGACCCATGGCACAACAATGTGTTGACCAGCCTCAAGTTCCACTA 830 0.4928 MAAQALVSSSSLTASVESARQILGARPVQSAVGYSKRASFIVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMMGAVGAIAPEILGKAGLIPQETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKAFSGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPWHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00550 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Bva12g00550 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 275 - -
Bva12g00550 276 Gene3D Chlorophyll a/b binding protein domain 57 275 - -
Bva12g00550 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Bva12g00550 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00550 Bva-Chr12 7435894 7437368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00550 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 85.507 9.06e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00550 K08909 - zju:107416800 484.567