Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00543 ATGGCCTTGCTTGTAATTCCAATGGTACTTGTAattctcttcttcattttcttatacTATTGGCGATGCAATAGAAACACACCGATTGGAGATTGGCCTATAGTTGGAATGCTTCCTGGGCTTTACCTTAATGCATCCAACATTCAGGATTATGCAACCATGCTTTTGAAACACCATGGAGGCACTTTAGTGTTTAAAGGTCCTTGGCTTTCAAACATGAAGTTCATCGCTACCTGCGACCCTATGAACTTACACCATATCTCCAGCAGAAGTTTTGAAAACTATGGAAAGGGGTCAGAGTTCCACGAAGTTTTTGAAATCCTAGGAGATGGGATTCTAAATGCTGATGGGGAGACATGGAAGTACAACAGGGCCCTTCTTCATTCATTGCTTAAACAGAGAAGCTTTGAGTCATTCCTTCAGAAAACCACGCAAGAGAAGGTGGAGAGCTGTCTACTTCCATTTCTTGATCATATATCAAAAGATGGAATGGAAGTGGACATGCAAGACACCTTTCAGAAGTTCTTCTTTGACATTGTTTGCTTAGCAATTCTTGGATTCGATCCCGATTGCCTTTCGACTGGATCTCCAAATGTTGCACTGGAGAAAGCTTTTAGTGAAATGGAGGCATCTATACTCTACAGACATATTGTGCCCCATTGCTTGTGGAAGCTCCAGAAATGGCTTCAAATTGGCGAGGAGAAGAAGTTGATTGAAGCACGGAAAATCATCGACCTGTTCTTACTAGAACAAATCACTTCCAAACGTAAAGTGCAAAGGAAATGCAACAATAACCAAGAAGGATGCTCTGACGTGCTAACAAACATTATGGTGCAGGAGTGGGAAAAGGGACAAATTGATGACAAATTTCTGAGAGACACTGCAATTAATCTCCTTGCTGCTGGGAGGGATACCATCAGTGCAGGCCTCTGTTGGTTTATCTGGCTTGTCGCAACACACCCATATGTAGAAGCCAAGATTATTGAAGAGATCAGAAGTAGTTTTCGAGACAAAAACGAAGCCTGCACGGCTTTTGGTTATGAAAAACTTGGCAAGCTGGTTTATCTCCATGCAGCTATATGTGAGACTTTGAGGCTTTATCCTCCCGTACCTATTAACCACAAGTGTGCTATGAAATCTGATACACTTCCTAGTGGCCATTATGTTGATTCAAACACAATGATATTATCTCTTATATATCCGATGGGAAGGATGAAGGAAGTATGGGGACAAGATTGCTTAGAATTCAAGCCAGAACGTTGGATTTCAGATACAGGAGAGATTGTGCATGTACCTTCTTACAAGTTTATGGCTTTTAATGCAGGTCCTAGAAGTTGTTTGGGTAAAAACATGAGCTTCATCAAAATGAAGATGGTTTCCGCTgctattttgttcaattatcACGTAGAGGTGGTTGAAGGCCATCCGGTATCTCCAAGTCCTTCCATTGTTCTTCATATGGAGCATGGCTTGAAGATTCCTGGATTAGATGCTTCTATTATCTTTCTGTG 1511 0.4057 MALLVIPMVLVILFFIFLYYWRCNRNTPIGDWPIVGMLPGLYLNASNIQDYATMLLKHHGGTLVFKGPWLSNMKFIATCDPMNLHHISSRSFENYGKGSEFHEVFEILGDGILNADGETWKYNRALLHSLLKQRSFESFLQKTTQEKVESCLLPFLDHISKDGMEVDMQDTFQKFFFDIVCLAILGFDPDCLSTGSPNVALEKAFSEMEASILYRHIVPHCLWKLQKWLQIGEEKKLIEARKIIDLFLLEQITSKRKVQRKCNNNQEGCSDVLTNIMVQEWEKGQIDDKFLRDTAINLLAAGRDTISAGLCWFIWLVATHPYVEAKIIEEIRSSFRDKNEACTAFGYEKLGKLVYLHAAICETLRLYPPVPINHKCAMKSDTLPSGHYVDSNTMILSLIYPMGRMKEVWGQDCLEFKPERWISDTGEIVHVPSYKFMAFNAGPRSCLGKNMSFIKMKMVSAAILFNYHVEVVEGHPVSPSPSIVLHMEHGLKIPGLDASIIFL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00543 503 SUPERFAMILY Cytochrome P450 18 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 495 - -
Bva12g00543 503 PANTHER CYTOCHROME P450 9 495 - -
Bva12g00543 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Bva12g00543 503 Gene3D Cytochrome P450 27 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00543 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00543 Bva-Chr12 7387508 7389311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00543 12 493 Cytochrome P450 AT4G39490 45.363 2.27e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00543 - - gmx:100785815 615.535