Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00542 ATGGTGCAGGAGTGGGAAAAGGGACAAATTGATGACAAATTTCTACGAGACACTGCAATTAATCTCCTTGCTGCTGGGAGGGATACCATCAGTGCAGGCCTCTGTTGGTTTATCTGGCTTGTCGCAAGACACCCATGTGTAGAAGCTAAGATTATTGAAGAGATCAGAAGTAGTTTTCGAGACAAAAAAGAAGCCTGCACGGCTTTTGGTTATGAAAAACTTGGCAAGCTGGTTTATCTCCATGCAGCTATATGTGAGACTTTGAGGCTTTATCCTCCCGTACCTATTAACCACAAGTGTGCTATGAAATCTGATACACTTCCTAGTGGCCATCATGTTGATTCAAACACAATGATATTATCTGCTATATATCCGATGGGAAGGATGAAGGAAGTATGGGGACAAGATTGCTTGGAATTCAAGCCAGAACGTTGGATTTCAGATACAGGAGAGATTGTGCCTGTACCTTCTTATAAGTTTATGACTTTCAATGCAGGTCCTAGAATTTGTTTGGGTAAAAACATGAGCTTCATTAAAATGAAGATGGTTGCTGCTGCTATTTTGTGTAATTATCATGTCCAGGTGGTTGAAGGTCATCCCGTATCTCCTTGTGCTTCAGTTGTACTTCATATGAAACATGGCTTGAAGGTTAGGGTTACAAAAAGGTGCAATTA 674 0.4095 MVQEWEKGQIDDKFLRDTAINLLAAGRDTISAGLCWFIWLVARHPCVEAKIIEEIRSSFRDKKEACTAFGYEKLGKLVYLHAAICETLRLYPPVPINHKCAMKSDTLPSGHHVDSNTMILSAIYPMGRMKEVWGQDCLEFKPERWISDTGEIVPVPSYKFMTFNAGPRICLGKNMSFIKMKMVAAAILCNYHVQVVEGHPVSPCASVVLHMKHGLKVRVTKRCN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00542 224 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 163 172 IPR017972 GO:0005506|GO:0016705
Bva12g00542 224 PANTHER CYTOCHROME P450 8 222 - -
Bva12g00542 224 PRINTS E-class P450 group I signature 170 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS E-class P450 group I signature 160 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS E-class P450 group I signature 34 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS E-class P450 group I signature 14 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS P450 superfamily signature 161 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS P450 superfamily signature 170 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 222 - -
Bva12g00542 224 SUPERFAMILY Cytochrome P450 5 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 Pfam Cytochrome P450 8 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00542 224 Gene3D Cytochrome P450 1 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00542 Bva-Chr12 7383166 7383840 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00542 11 224 Cytochrome P450 AT2G23180 54.206 6.14e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00542 - - gmx:100785815 308.145