Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00536 ATGCTTCCTGGGCTTTACCTTAATGCATCCAACATTCATGATTATGCAACCATGCTTTTGAAACACCATGGAGGCACTTTAGTGTTTAAAGGCCCTTGGCTTTCAAACATGAAGTTCATCGCTACCTGCGACCCTATGAACTTACACCATATCTCCAGCAGAAGTTTTGAAAACTATGGAAAAGGGTCAGAGTTCCACGAAGTTTTTGAAATCCTAGGAGATGGGATTCTAAATGCTGATGGGGAGACATGGAAGTACAGCAGGGCCCTTCTTCATTCATTGTTTAGACAGAGAAGCTTTGAGTTTTTCCTTCAGGAAACCATACAAGAGAAGCTGGAGAGCTgtcttcttccatttcttgATCATATATCAAAAGAAGGAATGGAAGTGGATATACAAGATACCTTTCAAAAGTTCATCTTTGACATTGTCAGCTTAGCAATTCTTGGATTCGATCCCGATTGCCTTTCGATTGGATCTCCAAATGTTGCATTGGAGAAAGCTTTTAGTGAAATAGAGGCATCAATACTCTACAGACATGTTGTGCCCCATTTCTTGTGGAAGCTGCAGAAATGGCTTCAAATTGGCGAGGAGAAGAAGTTGATTAAAGCACGGAAAATCATTGAAACGTTCTTACACGAACAAATCACTTCCAAACGTAAAGTGCAAAGGAAAtgcaacaataacaaaaaggATGAAGGATGCTCTGACGTGCTAACAAACATTATGGTGCAGGAGTGGGAAAAGGGACAAATTGATGACAAATTTCTACGAGACACTGCAATTAATCTCCTTGCTGCTGGGAGGGATACCATCAGTGCAGGCCTCTGTTGGTTTATCTGGCTTGTCGCAAGACACCCATGTGTAGAAGCTAAGATTATTGAAGAGATCAGAAGTAGTGTTCGAGACAAAAAAGAAGCCTGCACGGCTTTTGGTTATGAAAAACTTGGCAAGCTGGTTTATCTCCATGCAGCTATATGTGAGACTTTTAGGCTTTATCCTCCCGTACCTATTAACCACAAGTGTGCTATGAAATCTGATACACTTCCTAGTGGCCATCATGTTGATTCAAACACAATGATATTATCTGCTATATATCCGATGGGAAGGATGAAGGAAGTATGGGGACAAGATTGCTTGGAATTCAAGCCAGAACGTTGGATTTCAGATACAGGAGAGATTGTGCCTGTACCTTCTTATAAGTTTATGACTTTCAATGCAGGTCCTAGAAGTTGTTTGGGTAAAAACATGAGCTTCATTAAAATGAAGATGGTTGCTGCTGCTATTTTGTGCAATTATCATGTGCAGGTGGTTGAAGGTCATCCCGTATCTCCTTGTGCTTCAGTTGTACTTCATATGAAACATGGCTTGAAGGTTAGGGTTACAAAAAGGTGCAATTA 1400 0.3979 MLPGLYLNASNIHDYATMLLKHHGGTLVFKGPWLSNMKFIATCDPMNLHHISSRSFENYGKGSEFHEVFEILGDGILNADGETWKYSRALLHSLFRQRSFEFFLQETIQEKLESCLLPFLDHISKEGMEVDIQDTFQKFIFDIVSLAILGFDPDCLSIGSPNVALEKAFSEIEASILYRHVVPHFLWKLQKWLQIGEEKKLIKARKIIETFLHEQITSKRKVQRKCNNNKKDEGCSDVLTNIMVQEWEKGQIDDKFLRDTAINLLAAGRDTISAGLCWFIWLVARHPCVEAKIIEEIRSSVRDKKEACTAFGYEKLGKLVYLHAAICETFRLYPPVPINHKCAMKSDTLPSGHHVDSNTMILSAIYPMGRMKEVWGQDCLEFKPERWISDTGEIVPVPSYKFMTFNAGPRSCLGKNMSFIKMKMVAAAILCNYHVQVVEGHPVSPCASVVLHMKHGLKVRVTKRCN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00536 466 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 Gene3D Cytochrome P450 2 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 SUPERFAMILY Cytochrome P450 7 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 Pfam Cytochrome P450 33 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PANTHER CYTOCHROME P450 1 464 - -
Bva12g00536 466 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS E-class P450 group I signature 323 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00536 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Bva12g00536 466 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00536 Bva-Chr12 7360591 7361991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00536 1 465 Cytochrome P450 AT4G39490 47.182 1.88e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00536 - - gmx:100785815 580.867