Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00491 ATGGAAAGAGTGGAAGCTCTCTTGGCTATAATAACTGCAGCATTCTTCATGATGTTACTGATATGGGTTTTGAGAGAAAGCTGCAGAGGTGATAACGACGTCGTATATGAAAAACATGCATCAAGaggattttctcttctcattaCAATCACAGCAGTAGCCAGTAATGCTATTATCTCAGTTTTTCACTTGGGTTTTTCTGTTTATCAGTACAAAACTCAAAGAACTGTGTCCTGTAAGTCCCTTTCCTTGGCTTTAACTTGGGCTTTAACAACCATAGTTTCAATATATTCAAGGAAGAGAAGACTAAGTGAGAAGGGCAAGTGGCCCTTTATCTTAACCTTGTGGTGGTTCTCTGCCACTCTCATGGATTCTGCCTCAGTTTTATTTAAACTCAAGAAAGATTTCAAGTCCATAGATGTGTCTTTTCTCCAGCTCCTCTCAGATAACATAGTGGAAGTATGTTCATTCCCTTTCTTGTTATTGCTTTCTGCCAATTCTCTGCCCGCGAAGCACGATAACAATCATGATCTCGAACAAAACTTGCTTCAAAAGGAGGCAGAATCCTCATTGAAAGAAGATTTGGGGGAGTTCACAAATGCAGGTCTATGGAGCTATTTGTCATTTGGGTGGCTAAACCCAGTTTTCGAAAGAGGTAGAATCCAAAAGATTGAACTTGCTCATATTCCTTCAGTTCCAAAATCTGAAAAGGCAGAAAATGCATCTTCAGTGTTAGAAGAATCATTCAGAAGACAGAATGCTGAAGAGAGTTCCTTGACAAAAGCTGTCATCCATTCTATTTGGAAATCCCTGATTATGAATGCAGTTTTTGCAGGAGTAAGCACAATTGCCTCTTACATGGGTCCCTTGTTGATTACAAGCTACGTCAATTTCTTATCAAGGGATAGTGATggttcaagtttcaaatatggggtgattcttgcatttcttttcttcctgtCCAAGACAGTGGAGTCACTAACTCAAAGACAATGGTACTTTTGTGCTCAACGAATTGGAATACAAGTGCGTGCAGCTCTCTTTGTACTGATTTACCGTAAGTCAATATCCATTGACTGTGCCAGAGAAACAAATggtaaaatagtaaatttggTCAGTGTGGATGCTGAACAAATTGGGGACTTCTGCTTCCATATTCATGAAATCTGGTTGCTTCCTGTCCAAGTAATCTTGGCCTTGTTCATCCTGTACAAAAATTTGGGTTTTCTCCCTTCCATTGCTGCAGTTGCTGTCACCATTTTTGTAATGGCATCAAACACGCCCTTGGCCAAACTTCAAAAGAGCCTCCACTCTAAGATAATGGAAGCAAAGGATTCTAGAATCAAAGCAACTTCAGAGACTTTAAAGCACATCAGAATTCTGAAGATGCATTCTTGGGAAACTTCATTCCTAAGAAAAATCCTTAAGCTGAGAGAAACTGAGAAAAGATGGCTACAGAGACACCTCTATATATCTTCAATATCGGTTTTTCTGTTCTGGACATCCCCTACTGTAGTTGCTCTTGTCACTTTCGGGGTCTGCATTCTGATAAAAACAGAGTTAACTGCAGCTGCAGTCCTCTCAGCTATAGCAACTTTCGGTATTCTAACAGAACCAATCTACAACCTGCCTCAGCTAATCTCCAATATAGCTCGAACGAAAGTCTCCATTAATCGCATTCAGGAATTCGTTAAAgaagatagaaaaaataagttCTTGATCAACAACCACACTTTACAGTCTTCCAGAATTGCAATGGTAGTTGAGCCTGGTGAGTATGCTTGGGATGTAGATGATAAAAGTAAGAAGAAACCCACGATTCGAATCGCAGAGAAGTTGGAGATAGAGAAGGGTTGCAAGGTTGCAATTTGTGGGTCAGTTGGGTCTGGCAAGTCTAGCCTTCTAAGCTGTATGCTAGGTGAGATTCCAAGGATTTCTAGGGAAGGAATCAAAGTCTATGGAAATAGAAGTTATGCGCCCCAAAGTCCCTGGATTCAGTCTGGGACTATTAGGGACAATGTGTTGTTTGGGAAAGAAATGAATGAAGAGTTTTATGAGCGTTTTTTGGATGGCTGTGCCTTGCACCATGATATCAACATGTGGGAAGATGGAGACTTGACTCTGGTGGGGGAGAGAGGCATCAAGTTAAGTGGAGGCCAGAAACAAAGGATCCAACTAGCAAGAGCGATTTACAATGATGCAGATATTTATTTCCTCGACGATCCTTTCAGTGCTGTTGATACACACACTGGATCACATTTATATATgAAATGTCTGATGCAGGTTCTATCCAAGAAAACTGTTGTTTACGCTACCCATCAACTGGAATTTCTGGAAGCAGCAGATTTTGTATTGGTGATGAAAGGTGGAGAAATTGTTGAGACAGGAAAGTACAAAGAACTGATAACACGTCTAAATTCTGAACTCGTTAAACAAATGGCTGCTCACAAAGAAACATTAAACCACGTCAAGCCAATACATCAAACTGAAGcgaatgaagaaaatattaaggAGAACATGATCAAGGGTTGGAAGCTTTCAGAGAGAgccaaagaagatgaagaggaAGCTGCAGAGACTGGTAGAGTGAAATGGAGTGTTTACTCAACCTTTGTCTCTTCTGCTTATGGAGGCACACTTGTTCCCTTCATTCTTCTCTGCCATGTTCTCTTTCAAGCAATGCAGATTGGAAGCAATTACTGGATTGCTTGGGCTGCTGAGCACAGAGACATAGTCAGCCCCCAGAATCTCATAGGGATATTCACTCTAATATCTGGTGGTAGCTCCATCTTCATACTTGGTAGAGCTGTTTTGCTGTCAACAGTTGCTGTGGAGACGGCTCAGCGTCTTTACCATGGAATGATTGCATCAGTTTTTAGAGCACCAGTGTCATTTTTTGACACCACACCTTCCAGCAGAATCCTTAACAGGTCTTCTACGGACCAAAGTACAGTAGATACAGACATACCATACAGATTGGCTGGACTTGTATTTGCAGTAATCCAGTTATTGAGCATTATCATCCTAATGTCCCACGTTGCTTTACAAgtcatttttctcttccttcttgtGCTTGCGATCTCTGCATGGTATCAGGCTTATTACATCCCTACTGCAAGAGAATTAGCCAGGATGGTTGGGATTAGAAAGGCTCCAATCTTGCATCATTTCTCTGAATCAATTGCTGGGGCTGCTACAATCCGCTGTTTCAATCAAGAGCAAAGATTCTTGGCAAAAGTCATGGATCTTGCTGATGATTATTCTCGTGTCGCCTTCCACAATTATGCCACCATGGAATGGCTTTCCGTGAGAAtcaattttctgtttaacTTGGCCTTCTTCTTCGTTCTTGTTATCTTGGTTTCTCTCCCACGATCTAATGTTGATCCTAGCTTGGCAGGTTTGGCAGCAACATATGGCTTAAACTTGAACGTCAGTCAAGCTTGGGTGATATGGAATCTTTGCAATGTGGAGAATAAAATGATATCAGTAGAAAGAATACTCCAATTCACTAACATTCCAAGTGAGGCACCATTAATAGTTCAAGATTATAGGCCTGAGCCAGAGTGGCCAAAGGAGGGAAAGATTGAACTCCATAATCTTCATATCCAGTATGCTCCAGCTGCTCCTATGATACTCAAAGGGATCACTTGCACTTTACaagggcaaaagaaaattgggatTGTAGGCAGGACAGGGAGTGGGAAATCCACGTTTGTTCAAGCACTTTTCAGGGTAGTGGAGCCTTGTTTGGGGTGCATTATTATTGATGGAGTAGATATTAGAAAGATTGGCCTGCAAGACTTGAGATCCAAACTAGGCATAATTCCTCAGGATCCAACCTTATTCCAAGGGAGTGTGAGGACTAACTTGGATCCTCTAGAACAACATTCAGATCAAGAGCTCTGGGAGGTTCTCAAGAAGTGCCATCTTGCTGATATTGTAAGGCAAGACACAAGGTTGCTTGAAGCTCCAgTGGATGAGAATGGACAAAATTGGAGTGTTGGGCAAAGGCAGCTTGTTTCCCTTGCAAGGCTTCtgttgaagaaaagaagaatattagTTCTTGATGAGGCTACAGCTTCTATAGACACAGCAACTGATAATTTGATTCAGAAGACTATTAGAGAAGAGACAGTTGGATGTACGGTCATCACAGTGGCACATAGGATAAATACAATTATTGACAATGACTTAGTTCTTCTTCTTAACGAAGGAAAAATTGTAGAATATGATTCCCCATATCAGTTGCTAGAGAAcaattcttcatctttctctaAGATGGTGGCAGAATTTTGGAAGAGATCACAAGCAACAaccaaaacata 4328 0.3898 MERVEALLAIITAAFFMMLLIWVLRESCRGDNDVVYEKHASRGFSLLITITAVASNAIISVFHLGFSVYQYKTQRTVSCKSLSLALTWALTTIVSIYSRKRRLSEKGKWPFILTLWWFSATLMDSASVLFKLKKDFKSIDVSFLQLLSDNIVEVCSFPFLLLLSANSLPAKHDNNHDLEQNLLQKEAESSLKEDLGEFTNAGLWSYLSFGWLNPVFERGRIQKIELAHIPSVPKSEKAENASSVLEESFRRQNAEESSLTKAVIHSIWKSLIMNAVFAGVSTIASYMGPLLITSYVNFLSRDSDGSSFKYGVILAFLFFLSKTVESLTQRQWYFCAQRIGIQVRAALFVLIYRKSISIDCARETNGKIVNLVSVDAEQIGDFCFHIHEIWLLPVQVILALFILYKNLGFLPSIAAVAVTIFVMASNTPLAKLQKSLHSKIMEAKDSRIKATSETLKHIRILKMHSWETSFLRKILKLRETEKRWLQRHLYISSISVFLFWTSPTVVALVTFGVCILIKTELTAAAVLSAIATFGILTEPIYNLPQLISNIARTKVSINRIQEFVKEDRKNKFLINNHTLQSSRIAMVVEPGEYAWDVDDKSKKKPTIRIAEKLEIEKGCKVAICGSVGSGKSSLLSCMLGEIPRISREGIKVYGNRSYAPQSPWIQSGTIRDNVLFGKEMNEEFYERFLDGCALHHDINMWEDGDLTLVGERGIKLSGGQKQRIQLARAIYNDADIYFLDDPFSAVDTHTGSHLYMKCLMQVLSKKTVVYATHQLEFLEAADFVLVMKGGEIVETGKYKELITRLNSELVKQMAAHKETLNHVKPIHQTEANEENIKENMIKGWKLSERAKEDEEEAAETGRVKWSVYSTFVSSAYGGTLVPFILLCHVLFQAMQIGSNYWIAWAAEHRDIVSPQNLIGIFTLISGGSSIFILGRAVLLSTVAVETAQRLYHGMIASVFRAPVSFFDTTPSSRILNRSSTDQSTVDTDIPYRLAGLVFAVIQLLSIIILMSHVALQVIFLFLLVLAISAWYQAYYIPTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEQRFLAKVMDLADDYSRVAFHNYATMEWLSVRINFLFNLAFFFVLVILVSLPRSNVDPSLAGLAATYGLNLNVSQAWVIWNLCNVENKMISVERILQFTNIPSEAPLIVQDYRPEPEWPKEGKIELHNLHIQYAPAAPMILKGITCTLQGQKKIGIVGRTGSGKSTFVQALFRVVEPCLGCIIIDGVDIRKIGLQDLRSKLGIIPQDPTLFQGSVRTNLDPLEQHSDQELWEVLKKCHLADIVRQDTRLLEAPVDENGQNWSVGQRQLVSLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETVGCTVITVAHRINTIIDNDLVLLLNEGKIVEYDSPYQLLENNSSSFSKMVAEFWKRSQATTKT 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00491 1442 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 110 1438 - -
Bva12g00491 1442 Gene3D ABC transporter type 1, transmembrane domain 233 571 IPR036640 GO:0005524|GO:0016021
Bva12g00491 1442 SUPERFAMILY ABC transporter transmembrane region 265 564 IPR036640 GO:0005524|GO:0016021
Bva12g00491 1442 SMART AAA_5 617 791 IPR003593 -
Bva12g00491 1442 SMART AAA_5 1222 1405 IPR003593 -
Bva12g00491 1442 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524
Bva12g00491 1442 CDD ABCC_MRP_domain1 586 791 - -
Bva12g00491 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1188 1422 IPR027417 -
Bva12g00491 1442 CDD ABCC_MRP_domain2 1194 1414 - -
Bva12g00491 1442 Pfam ABC transporter 1213 1361 IPR003439 GO:0005524
Bva12g00491 1442 Pfam ABC transporter 613 743 IPR003439 GO:0005524
Bva12g00491 1442 Gene3D - 1179 1432 IPR027417 -
Bva12g00491 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 804 IPR027417 -
Bva12g00491 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1196 1430 IPR003439 GO:0005524
Bva12g00491 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 814 IPR003439 GO:0005524
Bva12g00491 1442 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 275 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g00491 1442 Pfam ABC transporter transmembrane region 271 539 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g00491 1442 Pfam ABC transporter transmembrane region 883 1123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva12g00491 1442 CDD ABC_6TM_ABCC_D2 881 1171 IPR044726 GO:0140359
Bva12g00491 1442 Gene3D - 594 841 IPR027417 -
Bva12g00491 1442 SUPERFAMILY ABC transporter transmembrane region 883 1176 IPR036640 GO:0005524|GO:0016021
Bva12g00491 1442 PANTHER OS01G0902100 PROTEIN 110 1438 - -
Bva12g00491 1442 CDD ABC_6TM_ABCC_D1 275 560 IPR044746 GO:0140359
Bva12g00491 1442 Gene3D ABC transporter type 1, transmembrane domain 844 1177 IPR036640 GO:0005524|GO:0016021
Bva12g00491 1442 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 883 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00491 Bva-Chr12 6963924 6971639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00491 597 839 Calmodulin-binding Proteins AT2G36910 28.352 1.75e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00491 - - adu:107481980 1911.73