Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00485 ATGGAGTTGATGGCCCCTTCAAccttattgtttcttttacttACACTTCTCTCGCTCCAATCTTCCTCTTCATCATTCACCAATGGCTTCTCCATCTCTGCGGAGAATCCACGAGATCTTATACTCTCACAAGATAAGATGTTCTCTGCTGGCTTTCATAAGGTTGGTGAAAATGCCTATTGCTTTGCCATCTGGTTCACCGAACCAAATGACCAAAACACCACAGTGGTTTGGATGGCAAACCGTGACCATCCTGTGAATGGAAAGCGCTCAACACTTTCTCTTCAGAAGACAGGCAATCTTGTCTTAACAGATGCAAATCAGTTCAACGTTTGGGCCACCAACACTTCCTCACGAAACACAGTAGAATTGGTTCTCAACAATGATGGCAACCTTATTCTACGGGAGGGACAAAACGGTGCCGTTTTGTGGCAAAGTTTTCATTATCCAAAAAACACACTTCTCCCTGGCCAAATTCTCACCAGAGACACACCACTTGTCTCCTCCAGAAGTGAGACAAACCATTCCTCTGGTTTCTATAAGCTTTTTTTTGACAACGATAATCTCCTTCGTCTTCTATATGATGGTGTTACTGTCTCAAGTATTTACTGGCCAGATCCTTGGCTTGTGAGTTGGGAAGCTGGAAGGACCACATATAATGGCAGTAGAGTTGCTGTTCTTGATGTCTTGGGTAAATTCAGTACATCTGACAATTTTACTGCCACCACTTCGGATTATGGCAGAGTTCTTCAAAGAAGGCTGAGACTTGATTATGATGGTAATATTCGAGTTTATAGCCGAGACCATGAGGGACAGAAATGGTATGTTTCATGGCAAGCCAAAGCTCAACCTTGCAAGATTCATGGCATATGTGGACCAAACAGTGTGTGTAGCAATGTCCGTTATTCTGGTAGAAAATGTTCTTGTCTTCctggttttaaaattaagaatgataGTGATTTGTCTTATGGGTGTGAACCAGAATTTCATTTGTCTTGCAGCAAAAATGAGTCTTATTTTAGACttataaaccatgtagagttCTTTGGCTATGACTTTGGCTACTACCCAAATTTCACATACAAGCAATGTGAGGATATGTGCTCGCAATTATGCAATTGCGTAGGCTTCCAATACTACTTTAAGAAGGACACTGGCCATGCTGATTGTTATCCTAAGTCGTTGTTGCTCAATGGGTATCGTTCCCCTGCTTTTGACGGAGCAATCTACTTGAAATTGCCAAAAGGGAGTTCATTCTCTCGCTACAGTGATGAATCTATCAGAAAATGTCCTCCTAGAGTCATTGAGAGAAGCTATGTCAAAAGACATGAAAAGGTGTTAGTGAAGGTCCTTCTATGGCTAGCCTGTGTAATTGCAGGGATTGAGGTTGTTGGCTTCTCCATAGTTTGGTCTTTCCTGACCATAACTAAGAAAAAGTCTGGTGTAGATCAAAGTTATCAACTCACTCCAAGTGGCTTCAGAAAATTTAGCTACTCTGAGTTGAAAAAGGCAACAAATGGATTCAGCCATGAGATTGGAAGGGGAGGTGGAGGAATTGTCTATAAGGCCGAATTGTCAGATCATCGAGTTGCAGCAGTAAAAAGACTCAATGAAGCTAACCAAGGAGAGAGCGAATTCCTAGCAGAGGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCAGAGGGCAAGCACAGACTCTTGGTGTATGAGTACATGGAGAATGGCTCTTTGGCAGAAAATCTCATATCAGAAAGACTTGACTGGAGAAAGAGGTACGACATTGCTTTAGGAACAGCTAGAGGTTTAGCATATTTGCATGAAGAATGTTTGGAATGGATTTTGCATTGTGATATAAAGCCTCAAAATATACTTTTGGATTCTAATTATCAACCTAAGGTAGCAGATTTCGGATTATCTAAGCTAAGAAATAGAAATGACATTAAGAATTTAAGCTTCTCTACGATAAAAGGAACTAGAGGCTATATGACACCAGAATGGATTTTCAACTTACCAATCACCTCTAAAGTAGATGTATACAGTTATGGAATTGTTGTCTTAGAGATAATAACTGGAAAGAGCCCATCAATGAGCATCGAAATCGCTGAAGGAGCAGAAACACATCATGGTAGGCTAGTAACTTGGGTAAGAAAGAGGATGAGTAAAGGATTAGAAATGACTTCCTGGGTGCAAGAAATCATAGATCCTGCAGTTGAAGGAAATTATGACATAAATAAGATGGAAATTTTGGCTAGGGTGGCATTGGATTGTgtagaggaagagaaagatgtAAGACCCAGTATGAGTCAAATTGTGGAAATGCTTCAAAACCCTGAAAATTATTCTCAACAATG 2378 0.3953 MELMAPSTLLFLLLTLLSLQSSSSSFTNGFSISAENPRDLILSQDKMFSAGFHKVGENAYCFAIWFTEPNDQNTTVVWMANRDHPVNGKRSTLSLQKTGNLVLTDANQFNVWATNTSSRNTVELVLNNDGNLILREGQNGAVLWQSFHYPKNTLLPGQILTRDTPLVSSRSETNHSSGFYKLFFDNDNLLRLLYDGVTVSSIYWPDPWLVSWEAGRTTYNGSRVAVLDVLGKFSTSDNFTATTSDYGRVLQRRLRLDYDGNIRVYSRDHEGQKWYVSWQAKAQPCKIHGICGPNSVCSNVRYSGRKCSCLPGFKIKNDSDLSYGCEPEFHLSCSKNESYFRLINHVEFFGYDFGYYPNFTYKQCEDMCSQLCNCVGFQYYFKKDTGHADCYPKSLLLNGYRSPAFDGAIYLKLPKGSSFSRYSDESIRKCPPRVIERSYVKRHEKVLVKVLLWLACVIAGIEVVGFSIVWSFLTITKKKSGVDQSYQLTPSGFRKFSYSELKKATNGFSHEIGRGGGGIVYKAELSDHRVAAVKRLNEANQGESEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLISERLDWRKRYDIALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLRNRNDIKNLSFSTIKGTRGYMTPEWIFNLPITSKVDVYSYGIVVLEIITGKSPSMSIEIAEGAETHHGRLVTWVRKRMSKGLEMTSWVQEIIDPAVEGNYDINKMEILARVALDCVEEEKDVRPSMSQIVEMLQNPENYSQQ 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00485 792 Gene3D - 22 148 IPR036426 -
Bva12g00485 792 Pfam Protein kinase domain 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00485 792 CDD PAN_AP_plant 329 414 - -
Bva12g00485 792 Gene3D Transferase(Phosphotransferase) domain 1 581 792 - -
Bva12g00485 792 ProSiteProfiles Protein kinase domain profile. 506 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00485 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Bva12g00485 792 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Bva12g00485 792 ProSiteProfiles Bulb-type lectin domain profile. 17 147 IPR001480 -
Bva12g00485 792 CDD B_lectin 41 150 IPR001480 -
Bva12g00485 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Bva12g00485 792 SUPERFAMILY Protein kinase-like (PK-like) 488 783 IPR011009 -
Bva12g00485 792 Pfam S-locus glycoprotein domain 239 316 IPR000858 GO:0048544
Bva12g00485 792 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 8 787 - -
Bva12g00485 792 Pfam D-mannose binding lectin 75 164 IPR001480 -
Bva12g00485 792 CDD STKc_IRAK 512 785 - -
Bva12g00485 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 204 IPR036426 -
Bva12g00485 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 787 - -
Bva12g00485 792 Gene3D Phosphorylase Kinase; domain 1 471 580 - -
Bva12g00485 792 SMART blect_4 30 150 IPR001480 -
Bva12g00485 792 SMART serkin_6 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00485 Bva-Chr12 6928158 6930728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00485 436 783 Receptor kinase-like Gene Family AT3G58690 35.580 9.53e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva12g00485 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00485 - - jre:108987254 1008.05