Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00466 ATGCTTCAAAGCTTGGTTCCTCGATCCTCAATCGATTCGAATCCCAACGGAGGTTCCTCAATGAAGACGACGAAGCGTGTAGAGCGGGAGTTTGACGGCGGCGATGATGATTCCCAGAGTGAGGATCCTTCGTTTAAGAGACCAAATTCTGGCCGGAATTTCTCTGGTGAGGCCTCTGTTTCCGGCGAGAAGACGGTGGAGGAAAGCGAGGGACAAGAAGAGCCTGTTTTTGAAGGTGAGTCCACCGGGTTGAGATTGTTGGCATTGTTGCTACAATGCGCTGAGTGCGTAGCCATGGATCATCTGGACGAGGCTAATGATCTGTTACCGGAGATCGCCGAGCTTTCCTCGCCGTTCGGAAGCTCAGCTGAGCGCGTCGGTGCGTACTTCGCTCACGCGCTGCAAGCCAGAGTGGTGAGTTCATGTCTCGGTACTTACACACCGCTCACCACAAGATCATTGACAATAGCTCATTCTCAGCGGATTTTTAACGCGTTCCAATCTTATAACTCAGTGAGTCCACTCGTGAAGTTCTCTCACTTCACTGCCAATCAAGCCATATTCCAAGCGCTGGACGGTGAGGATCGTGTCCACATCATTGACCTGGACATAATGCAAGGCCTTCAATGGCCTGGATTGTTCCACATCCTCGCTTCCCGGTCCAAAAAAATCCGATCGATGAGAATAACCGGGTTCGGGTCTTCCTCCGAGTTGCTCGAGTCAACAGGGCGAAGACTGGTAGATTTCGCGAGTTCACTCGGTATGCCCTTTGAGTTTCACCCGCTGGAGGGCAAAATCGGAAATGTAACGGACTTGAGTCAACTCGGGGTGAGACCAAACGAGGCTGTGGTGGTCCACTGGATGCATCATTGTCTTTACGATATCACTGGCAGCGATTTGGGAACGTTGAGATTGTTGACTTTGCTGAGACCCAAATTGATCACAACCGTTGAACAAGATCTTCGCCACGCAGGCACTTTTCTAGCTAGATTCGTAGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCTCTTGGGGACGGATTAAATGCAGATAGTCCAGAGAGGCATATGGTGGAGCAGCAGTTGTTTGGCTGCGAGATTAGGAATATCGTCGCCGTGGGTGGTCCCAAGAGAACGGGTGAGGTTAAGGTAGAGAGGTGGGGTGATGAGTTCATACGGGTAGGATTCCGACCCGTTTCTCTACGGGGCAACCCAGCTGCCCAGGCTAGTCTTTTGTTGGGGATGTTTCCGTGGAGAGGGTACACTCTGGTGGAGGAGAATGGGTGCTTAAAGTTAGGGTGGAAAGATCTTTCCCTGTTGACTGCCTCCGCTTGGCAGCCGTCAGATTA 1352 0.5163 MLQSLVPRSSIDSNPNGGSSMKTTKRVEREFDGGDDDSQSEDPSFKRPNSGRNFSGEASVSGEKTVEESEGQEEPVFEGESTGLRLLALLLQCAECVAMDHLDEANDLLPEIAELSSPFGSSAERVGAYFAHALQARVVSSCLGTYTPLTTRSLTIAHSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLVDFASSLGMPFEFHPLEGKIGNVTDLSQLGVRPNEAVVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITTVEQDLRHAGTFLARFVEALHYYSALFDALGDGLNADSPERHMVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDEFIRVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00466 450 ProSiteProfiles GRAS family profile. 77 447 IPR005202 -
Bva12g00466 450 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 447 IPR005202 -
Bva12g00466 450 MobiDBLite consensus disorder prediction 1 78 - -
Bva12g00466 450 Pfam GRAS domain family 87 447 IPR005202 -
Bva12g00466 450 MobiDBLite consensus disorder prediction 23 43 - -
Bva12g00466 450 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g00466 450 MobiDBLite consensus disorder prediction 44 62 - -
Bva12g00466 450 PANTHER SCARECROW-LIKE PROTEIN 23 76 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00466 Bva-Chr12 6617414 6619183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00466 23 450 GRAS Transcription Factor Family AT5G41920 63.510 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g00466 GRAS 4.5e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00466 - - zju:107404603 721.85