Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00437 ATGTCAAAGAGTTTCCTCTTTGCTATGCTAATTGGTCTAGCTCTTTCAGTTCTAAACCAAGCTCAAGATCAATCAGGCTTCATTAATATTGATTGTGGCATCCCTGCATCTAGCCGCTATGTTGAGTCAACGtcaaaactaaattatatttcagatGCTAGTTTCATAAACAGTGATATAAGTAAGAATGTATTAGATAGTAAACTCCAAGAGGAATATCAACGACAACTATGGAGTTTGAGAAACTTTCCGCTAGGAATAAGGAACTGCTATAAAATAAACGTTATACGTGGTTTTAGATATTTGATTCGTGCTGCTTTTCTTTATGGAAACTATGATGGCTTAAATAGTTTTCCAATATTTGATCTTTATCTTGGGGCTAATCTTTGGGATATAGTACAAATAAATGATGAGTCCGATGTTGAAAATTATGAGATCATAAACATTCCTGCTCTTGATTATGTACAAATTTGTCTAGTTAACACAAGCCTTGGCACACCATTTATTTCCTCTATAGAATTGAGGCCTCTCAACAATGATATGTATGTCACTGAATTTGGATCATTGGCACTCTGGAAGCGAGTGGATTTAGGCTCAACTAAATCATACAGCTACCCTGATGACGTCTATGATAGGATATGGACAACGGGCTGGGATGAGagtgaaaaaatttattggaagACATTAAGTGTTTCAATTCCTACCGGTAACTTAGAGAACAATGACTTCCAACCACCTGAAATTGTAATGAGCACCTTGGTTACACCAGCAAATGCAAGCGCTCCTTTGAAACTTTCCTGGACACCACCAAATACAAGTAACCAATACTATGTTTATATGCACTTTTCTGAGCTTCAAGAGTTGGCACAGAATGAGACGAGATCATTCAAGATCACCCTTAATGGCCAGATTTGGTCTAAATATATTGTACCAGACTACCTGGGCGTAACCACTACCTATACCACGTCAGCAATTAGTcgagaaaaatttgaatatcttCTTGTGAAGACTGAGAATTCGACCCTTCCTCCGATCTTAAACGCAATTGAGATTTATATAGTTAAAGAGTTTCCACTACCAGAAACAAACCAAGAAGATGTTGATGCAATTACAAGTATTCAATCAACTTATGGCTTGACAAAAAATTGGCAAGGAGATCCATGCAACCCCGTACAATTCTTGTGGGATGGTATAAATTGCACTTATGATGATGGTCAGAATCCTCCTAGAATCACAACTTTAGTTCTTGGTAAAGGTGGATTTGGAACAGTTTACCTGGGCTTTATTGATGATAATCTAGTAGCCGCGAAGATGCTTTCTCCATCACCAGCTCAAGGTTATCAACAATTCCAAGCCGAGGTTAAACTTCTGATGACAGTTCATCATAGAAACCTGACTTCCCTTGTTGGGTATtgcaatgaagaaaacaagaagggGCTTATTTATGAGTACATGGCTAATGGAAACCTACATGAACATCTTTCAGGTAAACACAACAAAGCAAAGTTCTTGACATGGGAAGACAGACTTCGGATATCTATTGATGCAGCCCAAGAATTAATCACAAATCAACAACCAGTGATGGTGAGGAATCAGGAGCAGATTCACATAAGCCAATGGGTTAGCTCCTTGGTTGAGAATGGGGATATAGAGAAGATTGTTTACTCCAGGTTACATGGAGAATTTGACAGCAACTCTGTCTGGAAAGCAGTTGAACTGGCAATGGCTTGTCTATCACCGAATGCCAATAGAAGGCCAACTATGAATGAGGTAGTGATTGAGCTTAAGGAATGTTTGGCAACAGCACTATCTCGGACAAACCAAAGTGATGTTAGTGAAACAAGGTTAGAGGAACAGCCGATGGTGAATATGTTTACAGAAACTCCCCACCCAAGGTA 1898 0.3746 MSKSFLFAMLIGLALSVLNQAQDQSGFINIDCGIPASSRYVESTSKLNYISDASFINSDISKNVLDSKLQEEYQRQLWSLRNFPLGIRNCYKINVIRGFRYLIRAAFLYGNYDGLNSFPIFDLYLGANLWDIVQINDESDVENYEIINIPALDYVQICLVNTSLGTPFISSIELRPLNNDMYVTEFGSLALWKRVDLGSTKSYSYPDDVYDRIWTTGWDESEKIYWKTLSVSIPTGNLENNDFQPPEIVMSTLVTPANASAPLKLSWTPPNTSNQYYVYMHFSELQELAQNETRSFKITLNGQIWSKYIVPDYLGVTTTYTTSAISREKFEYLLVKTENSTLPPILNAIEIYIVKEFPLPETNQEDVDAITSIQSTYGLTKNWQGDPCNPVQFLWDGINCTYDDGQNPPRITTLVLGKGGFGTVYLGFIDDNLVAAKMLSPSPAQGYQQFQAEVKLLMTVHHRNLTSLVGYCNEENKKGLIYEYMANGNLHEHLSGKHNKAKFLTWEDRLRISIDAAQELITNQQPVMVRNQEQIHISQWVSSLVENGDIEKIVYSRLHGEFDSNSVWKAVELAMACLSPNANRRPTMNEVVIELKECLATALSRTNQSDVSETRLEEQPMVNMFTETPHPR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00437 632 PANTHER OS07G0107800 PROTEIN-RELATED 11 416 - -
Bva12g00437 632 PANTHER PUTATIVE-RELATED 11 416 - -
Bva12g00437 632 Gene3D Transferase(Phosphotransferase) domain 1 517 619 - -
Bva12g00437 632 PANTHER OS07G0107800 PROTEIN-RELATED 415 522 - -
Bva12g00437 632 Pfam Malectin-like domain 30 353 IPR024788 -
Bva12g00437 632 ProSitePatterns Protein kinases ATP-binding region signature. 416 437 IPR017441 GO:0005524
Bva12g00437 632 Pfam Protein tyrosine and serine/threonine kinase 415 518 IPR001245 GO:0004672|GO:0006468
Bva12g00437 632 PANTHER PUTATIVE-RELATED 523 621 - -
Bva12g00437 632 PANTHER PUTATIVE-RELATED 415 522 - -
Bva12g00437 632 SUPERFAMILY Protein kinase-like (PK-like) 415 599 IPR011009 -
Bva12g00437 632 Gene3D Phosphorylase Kinase; domain 1 416 486 - -
Bva12g00437 632 ProSiteProfiles Protein kinase domain profile. 410 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00437 632 PANTHER OS07G0107800 PROTEIN-RELATED 523 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00437 Bva-Chr12 6154366 6158373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00437 519 614 Receptor kinase-like Gene Family AT5G59680 53.125 5.98e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00437 Malectin_like 8.1e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00437 - - gmx:100170722 474.552