Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00435 ATGTCAAAGAGCAGTTCCCTCTTTGCTTTGCTTATTGTTCTAGCTCTTGCTGTTCTGAACCAAGCTCAAGATCAATCAGGATCAACTACAGGATTTGGATACAGGTTCAATTATGACGTCTATGATCGCTACTGGGCTTCGGATGTGGTTAGTAATTATGTGAAACCATATAGTAAAATTCTTCCCGATTCCTTAAAGTCCAATGATTTCCTACCACCTGAAATTGTAATGAGCACCTTGGCTACAACTTTAAATGCTAGTGCTCCTCTGGAAATTTCATGGACACCAGAAGATGCAAGTATCCGATACTATGTTTATATGCACTTTGCTGAGCTCCGAATGTTAGCAAATAATGAGAAAAGAGCTTTCAACGTCATCCTCAATAGCCAGCCTCTAAATGTAACCATTGAACCAAAGAATTTATCTTCAAGTGGGTTGATTGGGGAGATAGATCCTTCCATCTCCAAGCTGACCATGTTAGAGAAGTTGGATTTATCAAACAATAGCTTAAATGGAGAAGTGCCTGCTTTTTTGTCCCAATTAAAGTTTTTGAAGATCTTAAATCCagataataataactttaCAGGCCTACTTCCACTTGAACTGATCGAAAAATCACAAAGAGGCACATTGTCAATAAGTTCTCCTCCATGCACAAACatcaaaaacaacaacaacaaaagcaaGAATGTTATTGTTCCTGTTGCAGCATCAGTTTGTgATATGACAGAAGAAAGGGATCCAAATGAAACATTGATGAAAATGCAGAAACGACAATATTCATATTCTGATGTCATTAACATCACCAACAACTTCGATAAAATTCTTGGCAAAGGTGGATTTGGAACAGTTTACCTTGGCTTTATTGATGATATTCAAGTAGCTGTGAAGATGCTTTCTCCAGAATCAACTCAAGGTCATCAACAATTCCAAGCAGAGGTTAAACTCCTATTGACAGTTCGTCATAGAAACTTAACTTCACTTATAGGGTATTGCAATGGAGACACCCACAAGGGGCTTATCTATGAGTACATGGCTAACGGAAACTTACATTA 1055 0.3678 MSKSSSLFALLIVLALAVLNQAQDQSGSTTGFGYRFNYDVYDRYWASDVVSNYVKPYSKILPDSLKSNDFLPPEIVMSTLATTLNASAPLEISWTPEDASIRYYVYMHFAELRMLANNEKRAFNVILNSQPLNVTIEPKNLSSSGLIGEIDPSISKLTMLEKLDLSNNSLNGEVPAFLSQLKFLKILNPDNNNFTGLLPLELIEKSQRGTLSISSPPCTNIKNNNNKSKNVIVPVAASVCDMTEERDPNETLMKMQKRQYSYSDVINITNNFDKILGKGGFGTVYLGFIDDIQVAVKMLSPESTQGHQQFQAEVKLLLTVRHRNLTSLIGYCNGDTHKGLIYEYMANGNLH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00435 351 PANTHER PUTATIVE-RELATED 20 131 - -
Bva12g00435 351 PANTHER PUTATIVE-RELATED 246 350 - -
Bva12g00435 351 Gene3D Phosphorylase Kinase; domain 1 241 344 - -
Bva12g00435 351 SUPERFAMILY Protein kinase-like (PK-like) 251 351 IPR011009 -
Bva12g00435 351 PANTHER OS07G0107800 PROTEIN-RELATED 140 240 - -
Bva12g00435 351 ProSitePatterns Protein kinases ATP-binding region signature. 276 297 IPR017441 GO:0005524
Bva12g00435 351 PANTHER OS07G0107800 PROTEIN-RELATED 20 131 - -
Bva12g00435 351 PANTHER OS07G0107800 PROTEIN-RELATED 246 350 - -
Bva12g00435 351 SUPERFAMILY L domain-like 140 215 - -
Bva12g00435 351 ProSiteProfiles Protein kinase domain profile. 270 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00435 351 Pfam Protein tyrosine and serine/threonine kinase 272 351 IPR001245 GO:0004672|GO:0006468
Bva12g00435 351 Pfam Malectin-like domain 27 145 IPR024788 -
Bva12g00435 351 Gene3D Ribonuclease Inhibitor 107 213 IPR032675 -
Bva12g00435 351 PANTHER PUTATIVE-RELATED 140 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00435 Bva-Chr12 6146258 6149642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00435 140 350 Receptor kinase-like Gene Family AT1G05700 39.700 8.57e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00435 Malectin_like 2.5e-22 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00435 - - vun:114185309 244.588