Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00434 ATGTCAAAGAGTTTCCTCTTTGCTTTGCTGATTGGTCTAGCTCTTGCTGTTCTGAACCAAGCTCAAGATCAATCAGGTTTCATTAGCATAGATTGTGGCCTCCCGGCAAATGACCACTATAACGAGCCAAgaacaaacataaattatatttcagatGCCTCATTCATAAGCAGTGGTATAAGCAAAAGAATACGAGATGAATTCAGAGTGCCCGATCAGAGACGACTGTCGAATTTGAGAAGCTTTccagaaggaaaaagaaactgctataaaataaatgttatacGCGGTTCTAAATATTTGATTCGTGCTGAATTTCTATACGGAAATTATGATGGATTAGGTAATCCTCCATTGTTTGAGCTTCATCTGGGAGCAAATCTTTGGAAGGAAGTGGAAATACGCAATGCATCCCTTGCTATGCATTTTGACATCATACACGTTCCTGCTCTTGATTATGTACAAATATGTTTGGTTAACACAGATTCTGGTACACCATATATTTCCACTATAGAATTGAGGCCTCTCAACAATAATACATATGTCACTGATTCTGAATCATTGGCACTTGTGACGCGGGAGAATTTAGGTTCAACTGAAGTATTCAGGTACAATGATGATGTTTATGATCGCTATTGGTACGCAGATGCGGACGTGGGTAAAAATGATCGTACGTCATTAAATGTTACAATTCCTGCCGGTTCCTTGAGGACCAACGATTTCCAACCACCTGAAATTGTAATGAGCACCTTTGTTACACCAGCAAATGCTAGCACTTCATTGTGCTTTTCCTTGGAATCAGGAAATGCAAATGATAAATTCTATGTTTATCTGCACTTTGCTGAGCTCCGAGAGTTAGCAAAGAATGAGACAAGAGCATTCAACATCACCCTCAATGGCCAGGTTCAGGATGGAAATCTTGTACCACAGTACCTTAGCGTAGTCACACATCCTAGCGTTGTCACACATTCTAACAGGTCAGCAATTAGTGTAGAAAGATTTGAATGTTGTCTTGTGAGGACTGAGAATTCAACCCTTCCTCCAATCTTAAACGCAAAGGAGATTTACTTAGTAAAAGAGTTCCCACAATCAGAAACAGACCAACAAGATTATGAAGCAATTACAAGCATCCAGTCAACTTATAGGTTGACCAAAAATTGGCAAGGAGATCCATGCAGCCCTATAGAGTACTTGTGGGATGGTCTAAATTGTACTAGTGATGGTTATAAAACCCCGAGAATTACAACTTTGAATTTATCTTCAAGTGGATTGACAGGGAAGATAGATCCTTCCATCTCTAAGCTGACCAGCTTAGAGAACTTggatttatcaaataataatttaagtggGGAAATGCCTACTTTTCTGTCTCAATTAGAGTTCCTAAAGACCCTAAATTTAGAGAATAATTACCTTACAGGTTCACTTCCCTCTGAACTGattgaaaaatcaagaagAGGTACACTGTCAATAAGAGTGAACCAAAATCCAAACATCAAGaacaacaacaaaagcaaGATTGTTACTATTGCAGTAGTAGCATCAGTTTGTGGGATTTTGATCATTCTGACAGTTGTGGCAGTTCCAATCTGGACCCTTAAGAGGACAAAACCAAAACATATGACAGTAGAAAGAGATCCAAATGACATATTAGTGAAAATTCAGAAACGACAATATTCGTATTTTGATGTCCTTAACATCACCAATAACTTTGAAAGAATTATTGGTAAAGGTGGATTCGGAACAGTTTACCATGGCTCTATTGATGATATAGAAGTAGCCGTGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCAGAGGTTAAACTTCTGATGACAGTTCATCATAGAAACCTAACTTCCCTTATAGGCTATTGCAATGAAGAAACCAAGAAGGGGCTTATCTATGAGTACATGGCTAATGGAAACTTACATGAGCATCTTTCagGTAAACACAGCAAATCAAAGTTCTTGACTTGGGAAGATCGGCTCCGGATATCTATAGATGCAGCCCAAGgATTGGACTACCTGCATAATGGTTGCAAGCCACCTATAACACACAGAGATATAAAATCTACAAACATTTTGTTGAATGAACattttcaaggaaaaatatcagattttggTCTATCCAAAACTGTGAAAGCAATAGACGAAGGGACTCAGACGTCAAGTATTGTTGGTGGTACCCCAGGTTATATGGACCCTGAATTCAAcgtaacaaacaaaataacagaTAAGAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTAGAGTTAATCACGAATCAACAACCAGTGATAGTAAGAAATGGTGAGATGATTCACATAGGCCAATGGGTTAATTCCTTGGTTAAGAATGGGGATATAAAGGAGATTGTTTACTCCGGGTTACATGGTGAACTTGACAGTAACTCTGCCTGGAAAGCAGTTGAATTAGCAATAGCTTGTGTATCACTAAATTCCAAGAGAAGGCCAACTATGAGTGAGGTAGTGGTTGGGCTTAAGGAATGTTTGGCAACAGCACTCCCTCAGACAAACCAAAGCGGTGTTACTACAACAGGATTAGAGGAAGAGTTAATATTGAATCCGTCTGTAGATTCTGCTCCCCAAGCAAGGTA 2636 0.3699 MSKSFLFALLIGLALAVLNQAQDQSGFISIDCGLPANDHYNEPRTNINYISDASFISSGISKRIRDEFRVPDQRRLSNLRSFPEGKRNCYKINVIRGSKYLIRAEFLYGNYDGLGNPPLFELHLGANLWKEVEIRNASLAMHFDIIHVPALDYVQICLVNTDSGTPYISTIELRPLNNNTYVTDSESLALVTRENLGSTEVFRYNDDVYDRYWYADADVGKNDRTSLNVTIPAGSLRTNDFQPPEIVMSTFVTPANASTSLCFSLESGNANDKFYVYLHFAELRELAKNETRAFNITLNGQVQDGNLVPQYLSVVTHPSVVTHSNRSAISVERFECCLVRTENSTLPPILNAKEIYLVKEFPQSETDQQDYEAITSIQSTYRLTKNWQGDPCSPIEYLWDGLNCTSDGYKTPRITTLNLSSSGLTGKIDPSISKLTSLENLDLSNNNLSGEMPTFLSQLEFLKTLNLENNYLTGSLPSELIEKSRRGTLSIRVNQNPNIKNNNKSKIVTIAVVASVCGILIILTVVAVPIWTLKRTKPKHMTVERDPNDILVKIQKRQYSYFDVLNITNNFERIIGKGGFGTVYHGSIDDIEVAVKMLSPSSAQGYQQFQAEVKLLMTVHHRNLTSLIGYCNEETKKGLIYEYMANGNLHEHLSGKHSKSKFLTWEDRLRISIDAAQGLDYLHNGCKPPITHRDIKSTNILLNEHFQGKISDFGLSKTVKAIDEGTQTSSIVGGTPGYMDPEFNVTNKITDKSDVYSFGVVLLELITNQQPVIVRNGEMIHIGQWVNSLVKNGDIKEIVYSGLHGELDSNSAWKAVELAIACVSLNSKRRPTMSEVVVGLKECLATALPQTNQSGVTTTGLEEELILNPSVDSAPQAR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00434 878 Pfam Leucine Rich Repeat 462 479 IPR001611 GO:0005515
Bva12g00434 878 Gene3D Phosphorylase Kinase; domain 1 552 643 - -
Bva12g00434 878 Gene3D Transferase(Phosphotransferase) domain 1 644 858 - -
Bva12g00434 878 SUPERFAMILY Protein kinase-like (PK-like) 550 838 IPR011009 -
Bva12g00434 878 SUPERFAMILY L domain-like 383 482 - -
Bva12g00434 878 SMART serkin_6 569 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00434 878 CDD STKc_IRAK 575 837 - -
Bva12g00434 878 PANTHER OS07G0107800 PROTEIN-RELATED 10 878 - -
Bva12g00434 878 Pfam Malectin-like domain 30 357 IPR024788 -
Bva12g00434 878 Pfam Protein tyrosine and serine/threonine kinase 571 838 IPR001245 GO:0004672|GO:0006468
Bva12g00434 878 Gene3D Ribonuclease Inhibitor 371 500 IPR032675 -
Bva12g00434 878 PANTHER PUTATIVE-RELATED 10 878 - -
Bva12g00434 878 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Bva12g00434 878 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Bva12g00434 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Bva12g00434 878 ProSiteProfiles Protein kinase domain profile. 569 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00434 Bva-Chr12 6135415 6139431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00434 1 878 Receptor kinase-like Gene Family AT1G51800 46.137 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00434 Malectin_like 7.9e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00434 - - gmx:100785345 966.066