Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00431 ATGTCAAAGAGTTTCCTTTTTGCTTTGCTGATTGGTCTAGCTCTTGCTGTTCTGAACCAAGCTCAAGATCAGTCAGGTTTCATTAGCATAGATTGTGGCCTCCTCCCTACAAATATCCACTATACCGAGGAAAatacaaacataaattatatttcagatGCCCGTTTCATAAGCAGTGTGCAAATAACCAATGCATACCGTGCTACAACTTTTGAGATCATACACATTCCTGCTCTTGATTATGTACAAATATGTTTGGTTAACACATATTCTGGTACACCATTTATTTCCGCTATAGAATTGAGGCCTCTCAACAATAATGCATATGTCACTGATTCTGAATCATTGGCACTTTGGATGCGGGTGGATTTAGGTTCAACTAAAGCATTCAGGTACAATTATGATGTTTATGATCGCTTTTGGTACTCGGATGTGGACGTGGGTGAAAATGATCGGACATCATTAAATGTTCCAATTCGTGCCGGTTCCTTAAGGACCAACAAATTCCAACCACCTGAAATTGTAATGAGCACCTTGATTACACCTGCAAATGCTAGCACTACATTGTGCTTTTCCTGGACATCAACAAATGCAAATAACAAATACTATGTTTATCTGCACTTTGCTGAGCTCCGAGTGTTAGCAAAGAATGAGACAAGAGCATTCAACATCATCCTCAATGGCCAGGTTCAGTATGGAAATCTTGTACCACAGTATCTCAGCGTAGTCACATATTTTACCAGGTCAGCAATTAGTGGAGAAAGATTTGAATATTGTCTTGTGAGGACTGAGAATTCAACCCTTCCTCCAATCTTAAACGCAATTGAGATTTATACAGTAAAAGAGCTCCCACAATTAGAAACAGACCAAGAAGATTATGAAGCAATTACAAGCATCCAGTCAACTTATGGGTTGACAAAAAATTGGCAAGGAGATCCATGCAGCCCTATAGAGTACTTGTGGGATGGTCTAAATTGTACTAACGATGGTTATAAAACCTGGAGAATTACAACTTTGAAGTTATCTTCAAGTGGATTGACAGGGGAGATAGATCCTTCCatctccaagttgaccatgttggAGAAGCTGGATTTATCAAACAATAGCTTAAATGGGGAAGTGCCTGATTTTCTATCTCAATTAGAGCTCTTGACATCCCTaaatctagataataataatcttaCAGGTCCAGTTCCCGCTGAACTGattgaaaaatcaagaatagATATGACAACAGAAAGGGATCCAAAAGACACATTAATGAAAATCCAGAAACGGCAATATTCATATTCTGATGTCATTAACATCACCAACAACTTTGATAAAATCATTGGTAAAGGTGGATTTGGAACAGTTTACCTTGGCTTTATTGATGATATTCGTGTAGCGGTGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCAGAGGTTAAACTTTTGATGACAGTTCACCATAGAAACTTGACATCCCTTATAGGGTATTGTAATGAAGAAACCAACAAGGGGCTTATCTATGAGTACATGGCTAATGGGAACTTGAATGAGCACCTTTCagGTAAACACAGCAAATCAAAGTTCTTGACTTGGGAAGACCGACTTCGGATATCTATTGATGCAGCCCAAGGATTGGAGTACTTGCATAATGGTTGCAAGCCACCTATAACACACAGAGACATAAAATCTACAAACATCCTGTTGAATGAACATTTCCAAGCAAAAATATCTGATTTTGGTCTATCAAAAACTATGGTAACAACTTTGGGGGGAACTCAGTTGTCAAGTCTTCTTGGTGGTACCCCAGGTTATATGGACCCTGAGTTCTACAtaacaaatagaataatagataagagtgatgtttatagttttggagttGTTCTTTTGGAGTTAATCACAAATCAACAACCAGtgatagaaagaaataatgagATGATTCACATAAGCCAATGGGTTAGCTCCATGGTAGCGAATGGGGATATAAAGCAGATTGTTTACTCCAGATTACAAGGCGAATTTAACAGTAACTCTGCCTGGAAAGCAGTCGAAATAGCAATGGCTTGTGTATCACCAAATTCCAAGAGAAGGCCATCCATGAGTGAGGTAGTGATTGAGCTGAAGGAAAGTTTGGCAACCGCACTACCTCCAACAAGCCAAAGTGGTGTTAGTGCAACAGGGTCACAGGAAGAGGTGATAATGAATCTATCGGTGGACTCTACTCCCCTAGCGAGGTA 2243 0.3736 MSKSFLFALLIGLALAVLNQAQDQSGFISIDCGLLPTNIHYTEENTNINYISDARFISSVQITNAYRATTFEIIHIPALDYVQICLVNTYSGTPFISAIELRPLNNNAYVTDSESLALWMRVDLGSTKAFRYNYDVYDRFWYSDVDVGENDRTSLNVPIRAGSLRTNKFQPPEIVMSTLITPANASTTLCFSWTSTNANNKYYVYLHFAELRVLAKNETRAFNIILNGQVQYGNLVPQYLSVVTYFTRSAISGERFEYCLVRTENSTLPPILNAIEIYTVKELPQLETDQEDYEAITSIQSTYGLTKNWQGDPCSPIEYLWDGLNCTNDGYKTWRITTLKLSSSGLTGEIDPSISKLTMLEKLDLSNNSLNGEVPDFLSQLELLTSLNLDNNNLTGPVPAELIEKSRIDMTTERDPKDTLMKIQKRQYSYSDVINITNNFDKIIGKGGFGTVYLGFIDDIRVAVKMLSPSSAQGYQQFQAEVKLLMTVHHRNLTSLIGYCNEETNKGLIYEYMANGNLNEHLSGKHSKSKFLTWEDRLRISIDAAQGLEYLHNGCKPPITHRDIKSTNILLNEHFQAKISDFGLSKTMVTTLGGTQLSSLLGGTPGYMDPEFYITNRIIDKSDVYSFGVVLLELITNQQPVIERNNEMIHISQWVSSMVANGDIKQIVYSRLQGEFNSNSAWKAVEIAMACVSPNSKRRPSMSEVVIELKESLATALPPTSQSGVSATGSQEEVIMNLSVDSTPLAR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00431 747 PANTHER PUTATIVE-RELATED 413 747 - -
Bva12g00431 747 PANTHER OS07G0107800 PROTEIN-RELATED 413 747 - -
Bva12g00431 747 Gene3D - 117 281 - -
Bva12g00431 747 PANTHER PUTATIVE-RELATED 10 59 - -
Bva12g00431 747 PANTHER PUTATIVE-RELATED 65 406 - -
Bva12g00431 747 SUPERFAMILY L domain-like 303 402 - -
Bva12g00431 747 SUPERFAMILY Protein kinase-like (PK-like) 419 708 IPR011009 -
Bva12g00431 747 CDD STKc_IRAK 444 711 - -
Bva12g00431 747 ProSiteProfiles Protein kinase domain profile. 438 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00431 747 PANTHER OS07G0107800 PROTEIN-RELATED 10 59 - -
Bva12g00431 747 PANTHER OS07G0107800 PROTEIN-RELATED 65 406 - -
Bva12g00431 747 ProSitePatterns Protein kinases ATP-binding region signature. 444 465 IPR017441 GO:0005524
Bva12g00431 747 Pfam Malectin-like domain 56 280 IPR024788 -
Bva12g00431 747 SMART serkin_6 438 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00431 747 Gene3D Transferase(Phosphotransferase) domain 1 513 721 - -
Bva12g00431 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Bva12g00431 747 Gene3D Phosphorylase Kinase; domain 1 420 512 - -
Bva12g00431 747 Pfam Protein tyrosine and serine/threonine kinase 440 708 IPR001245 GO:0004672|GO:0006468
Bva12g00431 747 Pfam Leucine rich repeat 336 394 IPR001611 GO:0005515
Bva12g00431 747 Gene3D Ribonuclease Inhibitor 293 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00431 Bva-Chr12 6117778 6121587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00431 58 747 Receptor kinase-like Gene Family AT1G51800 43.338 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00431 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00431 - - pvu:PHAVU_005G162300g 768.844