Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00430 ATGTTCAAGtttcaatattttgttgaTATGCTTAATCCTCTCTGTGTTGATGTTTATGTTTCAGGCTTCATTAATATTGATTGTGGCATCCCTGCATCTAGCCGCTATGTTGAGTCAACatcaaaactaaattatatttcagatGCCAGTTTCATAAATAGTGGTATAAGTAAGAATGTATTAGATAGTAAACTCCAAGAGGAATATCAACGACAACTGTGGAGTTTGAGAAGCTTTCCGCTAAGAATAAGGAACTGCTATAAAATAAACGTTATACGTGGTTCTAGATATTTGATTCGTGCTAGTTTTCTTTATGGAAACTATGATGGCTTAAATAGTTTTCCAATATTTGATCTTTATCTTGGGGCTAATCTTTGGGATATAGTACAAATAAATGATGCGTCCGATGTTGAAAATTATGAGATCATAAACATTCCTGCTCTtgattatgtaaaaatttgtCTAGTTAACACAAGCCTTGGCACACCATTTATTTCCTCTATAGAATTGAGGCCTCTCAACAATGATATGTATGTCACTGAATTTGGATCATTGGCACTCTGGAAGCGAGTGGATTTAGGCTCAACTAAATCATACAGCTACCCTGATGACGTCTATGATAGGATATGGACAACGGACTGGGATGAGagtgaaaaaatttattggaagACATTAAGTGTTTCAATTCCTACCGGTAACTTAGAGAACAATGACTTCCAACCACCTGAAATTGTAATGAGCACCTTGGTTACACCAGCAAATGCAAGCGCTCCTTTGAAACTTTCCTGGACACCACCAAATACAAGTAACCAATACTATGTTTATTTGCACTTTTCTGAGCTTCAAGAGTTGGCACAGAATGAGACGAGATCATTCAACATCACCCTTAATGGCCAGATTCGGTCTAAATATATTGTACCAGACTACCTGGGCGTAACCACTACTTATACCACGTCAGCAATTAGTcgagaaaaatttgaatatcttCTTGTGAAGACTGAGAATTCGACCCTTCCTCCGATCTTAAATGCAATTGAGATTTATATAGTTAAAGAGTTTCCACTACCAGAAACAAACCAAGAAGATGTTGATGCAATTACAAGTATTCAATCAACTTATGGCTTGACAAAAAATTGGCAAGGAGATCCATGCAACCCCGTACAATTCTTGTGGGATGGCATAAATTGCACTTATGATGATGGTCAGAATTCTCCTAGAATCACAACTTTgGATTTTTCAAACAATAGCTTAAATGGGGAAGTTCCTGCTTTTCTATCACAATTAGAGTTCTTGAAGATCCTAAATCTCGAGAGCAATAACTTTTCAGGTTCACTACTCTCTGAACtcattgaaaaatcaaatagagGTACATTGTCAATAAGAGTTCTTGGTAAAGGTGGATTTGGAACAGTTTACCTGGGCTTTATTGATGATAATCTAGTAGCCGCGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCCGAGGTTAAACTTCTGATGACAGTTCATCATAGAAACCTGACTTCCCTTGTTGGGTATtgcaatgaagaaaacaacaagGGGCTTATTTATGAGTACATGGCTAATGGAAACCTACGCAAACATCTTTCAGGTAAACACAACAAAGCAAAGTTCTTGACATGGGAAGACAGACTTCGGATATCTATTGATGCAGCCCAAGGATTGGAATACCTGCATAATGGTTGCAAGCCACCTATAATACATAGAgacataaaatttacaaatatcttGTTGAATGAACATTTCCAAGCAAAATTATCAGATTTTGGTCTATCAAAAACTATGGCACCACCAACAGAGGGGAGAACTCAGTTATCGAGTGTTGTTGGTGGTACCCCAGGTTACATAGACCCTGAATTCTATAGAACAAGTAGATTAACAGATAAGAGTGatatttatagctttggagTTGTTCTTTTAGAGTTAATCACAAATCAACAACCAGTGATGGTAAGGAATCATGAGCAGATTCACATAAGCCAATGGGTTAGCTCCTTGGTTGAGAATGGGGATATAAAGAAGATTGTTTACTCCAGGTTACATGGAGAATTTGACAGCAACTCTGTCTGGAAAGCAGTTGAACTGGCAATGGCTTGTCTATCACCGAATGCCAATAGAAGGCCAACTATGAATGAGGTAGTGATTGAGCTTAAGGAATGTTTGGCAACAGCACTATCTCGGACAAACCAAAGTGATGTTAGTGAAACAAGGTTAGAGGAACAGCCGATGGTGAATATGTTTACAGAAACTCCCCACCCGAGGTA 2300 0.3587 MFKFQYFVDMLNPLCVDVYVSGFINIDCGIPASSRYVESTSKLNYISDASFINSGISKNVLDSKLQEEYQRQLWSLRSFPLRIRNCYKINVIRGSRYLIRASFLYGNYDGLNSFPIFDLYLGANLWDIVQINDASDVENYEIINIPALDYVKICLVNTSLGTPFISSIELRPLNNDMYVTEFGSLALWKRVDLGSTKSYSYPDDVYDRIWTTDWDESEKIYWKTLSVSIPTGNLENNDFQPPEIVMSTLVTPANASAPLKLSWTPPNTSNQYYVYLHFSELQELAQNETRSFNITLNGQIRSKYIVPDYLGVTTTYTTSAISREKFEYLLVKTENSTLPPILNAIEIYIVKEFPLPETNQEDVDAITSIQSTYGLTKNWQGDPCNPVQFLWDGINCTYDDGQNSPRITTLDFSNNSLNGEVPAFLSQLEFLKILNLESNNFSGSLLSELIEKSNRGTLSIRVLGKGGFGTVYLGFIDDNLVAAKMLSPSSAQGYQQFQAEVKLLMTVHHRNLTSLVGYCNEENNKGLIYEYMANGNLRKHLSGKHNKAKFLTWEDRLRISIDAAQGLEYLHNGCKPPIIHRDIKFTNILLNEHFQAKLSDFGLSKTMAPPTEGRTQLSSVVGGTPGYIDPEFYRTSRLTDKSDIYSFGVVLLELITNQQPVMVRNHEQIHISQWVSSLVENGDIKKIVYSRLHGEFDSNSVWKAVELAMACLSPNANRRPTMNEVVIELKECLATALSRTNQSDVSETRLEEQPMVNMFTETPHPR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00430 766 ProSitePatterns Protein kinases ATP-binding region signature. 463 484 IPR017441 GO:0005524
Bva12g00430 766 Pfam Malectin-like domain 26 349 IPR024788 -
Bva12g00430 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Bva12g00430 766 Gene3D - 187 350 - -
Bva12g00430 766 PANTHER PUTATIVE-RELATED 20 462 - -
Bva12g00430 766 PANTHER PUTATIVE-RELATED 461 755 - -
Bva12g00430 766 Gene3D Transferase(Phosphotransferase) domain 1 533 754 - -
Bva12g00430 766 SUPERFAMILY Protein kinase-like (PK-like) 453 728 IPR011009 -
Bva12g00430 766 Gene3D Ribonuclease Inhibitor 363 462 IPR032675 -
Bva12g00430 766 PANTHER OS07G0107800 PROTEIN-RELATED 20 462 - -
Bva12g00430 766 PANTHER OS07G0107800 PROTEIN-RELATED 461 755 - -
Bva12g00430 766 ProSiteProfiles Protein kinase domain profile. 457 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00430 766 Gene3D Phosphorylase Kinase; domain 1 463 532 - -
Bva12g00430 766 SMART serkin_6 457 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00430 766 SUPERFAMILY L domain-like 399 449 - -
Bva12g00430 766 CDD STKc_IRAK 463 731 - -
Bva12g00430 766 Pfam Protein kinase domain 460 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00430 Bva-Chr12 6106662 6110589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00430 461 746 Receptor kinase-like Gene Family AT1G51890 59.790 1.11e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00430 Malectin_like 5.6e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00430 - - cic:CICLE_v10027271mg 741.88