Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00428 ATGTCAAAGAGTTTCCTCTTTGCTCTGCTAATTGGTCTAGCTCTTGCTGTTCTAAATCAAGCTCAAGATCAATCAGGCTTTATTAGTATAGATTGTGGCCTCCAAGAAAATGGCCGCTATACTGAGCCACATACAGAAATAGATTATGTTTCAGATGCCGGTTTCATAAGCAGTGGTGTAATTCATCAATTGCcagatgaaataaaaagcaaatttTTCAATCGTCAAAATTTTTGGACTTACAGAAGCTTTCCAGAAGGAAGAAGGAATTGTTACAAAATAAATGTCATTCCTGGTGCTAGAAATTTAATTCGAGCTGTTTTTCTGTATGGAAATTATAATGGGTCAAATAGCTTTTCATCATTCGATCTTCATTTGGGACCTAATTATTGGGATTCAGTGCAAATAGAAGACAGAGGGAATCCTTATCATTTTGAGATCATACATATTCCTTCTCTTGATTATCTACAAATTTGTCTGATTAACAAATTTCTTGGGACACCATTTATTAACTCTTTAGAATTGAGGCCTCTCAACAATAATACATACATCACTGATTCTGGATCATTAGCACTCGTGAAGAAACGGTTTGATTTAGGTTTAACCATTGAAACGACATACAGATTCAACTACGATGTCTATGATCGCATCTGGTGGAAGTTGGATGAGCAGGTGGGTCAAAATAATTGGACATCATTCAGTAATTCAATTCCTGCTGGTTCCTTAAAGAACAACGATTTCCAACCACCTGAAATTGTAATGAGTACCTGGGTTACACCAGTAAATGCTAGTGCTCCTTTGAACTTTTCCTGGACACCACCAAAAGCAAGTAATCAGTACTATGTTTATATGCACTTTGCTGAGCTCCAAGAGTTAGCAAAGAATGAGACAAGAGCATTCAATGTCATCCTCAATGGCCAGACTCAAAACGAAACTATTGTGCCAAAGTACCTAAAGGTAGACACTTTCTATAGCAGGTCAGCAATTAGTGGAGAAAGATTTGAAATTCTTCTTGTGAGGACTCAGAATTCGACCCTTCCTCCCATCTTAAACGcaattgagatttataaagtaaaagagTTCCCACAATCAGAAACAAACCAAGAAGATTTTGATGCAATTACAAGTATCCAGTCAACTTATGGGTTGAAAAGAAATTGGCAAGGAGATCCATGCAGCCCTATAGAATATTTGTGGGATGGTCTAAACTGTACTGATGATGGTTATAATTCCTCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGACAGGGAAGGTAGATTCTTCCATCTCTAAGCTGACCAGggatttatcaaataatagttTGAATGGGGAAATGCCTACTTTTCTGTCTCAATTAGAGTTCCTAAAGACCCTAAATCTAGAGAATAATTACCTTACAGGTTCACTTCCCTCTGAACTGattgaaaaatcaagaagAGGTACACTGTCAATAAGAGTGAACCAAAATCCAAACATCAAgaacaataacaaaagaaagaatgttACTATTGCAGTAGTAGCATCGGTTTGTGGGGTTTTGATCATTCTGACAGTTGTGGCAGTTCTAATCTGGACCCTTAAGAGGACAAAACCAAAACATATGACAATAAAAAGAGATCCAAATGACACATTAGTGAAAATTCAGAAACGACAATATTCGTATTTTGATGTCATCAACATCACCAATAACTTTGAAAGAATTATTGGTAAAGGTGGATTCGGAACCGTTTACCATGGCTCTATTGATGATATGGAAGTAGCCGTGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCAGAGGTTAAACTTCTGATGACAGTTCATCATAGAAACCTAACTTCCCTTATAGGCTATTGCAATGAAGAAACCAACAAGGGGCTTATCTATGAGTACATGGCTAATGGAAACTTACATGAGCATCTTTCagGTAAACACAGCAAATCAAAGTTCTTGACTTGGGAAGATCGGCTCCGGATATCTATAGATGCAGCCCAAGGATTGGAGTACCTGCATAATGGTTGCAAGCCACCTATAACACACAGAGATATAAAATCTACAAACATCTTGTTGAATGAACattttcaaggaaaaatatcagattttggTCTATCCAAAACTGTGAAAGCAATAGACGAAGGGACTCAGACGTCAAGTATTGTTGGTGGTACCCCAGGTTACATGGACCCTGAATTCAAcgtaacaaacaaaataacagaTAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTAGAGTTAATCACAAATCGACAACCAGTGATAGTAAGAAATGGTGAGATGATTCACATAGGCCAATGGGTTAATTCCTTGGTTAAGAATGGGGATATAAAGAAGATTGTTTACTCCGGGTTACATGGTGAATTTGACAGTAACTCTGCCTGGAAAGCAGTTGAATTAGCAATAGCTTGTGTATCACTAAATTCCAAGAGCAGGCCAACCATGAGTGAGGTAGTGGATGGGCTTAAGGAATGTTTGGCAACAGCACTACCTCAGACAAACCAAAGCGGTGTTACTACAACAGGATTAGAGGAAGAGTTAATATTGAATCCGTCTGTAGATTCTGCTCCCCAAGCAAGGTA 2624 0.3609 MSKSFLFALLIGLALAVLNQAQDQSGFISIDCGLQENGRYTEPHTEIDYVSDAGFISSGVIHQLPDEIKSKFFNRQNFWTYRSFPEGRRNCYKINVIPGARNLIRAVFLYGNYNGSNSFSSFDLHLGPNYWDSVQIEDRGNPYHFEIIHIPSLDYLQICLINKFLGTPFINSLELRPLNNNTYITDSGSLALVKKRFDLGLTIETTYRFNYDVYDRIWWKLDEQVGQNNWTSFSNSIPAGSLKNNDFQPPEIVMSTWVTPVNASAPLNFSWTPPKASNQYYVYMHFAELQELAKNETRAFNVILNGQTQNETIVPKYLKVDTFYSRSAISGERFEILLVRTQNSTLPPILNAIEIYKVKEFPQSETNQEDFDAITSIQSTYGLKRNWQGDPCSPIEYLWDGLNCTDDGYNSSRITTLNLSSSGLTGKVDSSISKLTRDLSNNSLNGEMPTFLSQLEFLKTLNLENNYLTGSLPSELIEKSRRGTLSIRVNQNPNIKNNNKRKNVTIAVVASVCGVLIILTVVAVLIWTLKRTKPKHMTIKRDPNDTLVKIQKRQYSYFDVINITNNFERIIGKGGFGTVYHGSIDDMEVAVKMLSPSSAQGYQQFQAEVKLLMTVHHRNLTSLIGYCNEETNKGLIYEYMANGNLHEHLSGKHSKSKFLTWEDRLRISIDAAQGLEYLHNGCKPPITHRDIKSTNILLNEHFQGKISDFGLSKTVKAIDEGTQTSSIVGGTPGYMDPEFNVTNKITDKSDVYSFGVVLLELITNRQPVIVRNGEMIHIGQWVNSLVKNGDIKKIVYSGLHGEFDSNSAWKAVELAIACVSLNSKSRPTMSEVVDGLKECLATALPQTNQSGVTTTGLEEELILNPSVDSAPQAR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00428 874 Gene3D Phosphorylase Kinase; domain 1 547 639 - -
Bva12g00428 874 ProSiteProfiles Protein kinase domain profile. 565 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00428 874 SMART serkin_6 565 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00428 874 PANTHER OS07G0107800 PROTEIN-RELATED 10 874 - -
Bva12g00428 874 PANTHER PUTATIVE-RELATED 10 874 - -
Bva12g00428 874 Gene3D Ribonuclease Inhibitor 371 496 IPR032675 -
Bva12g00428 874 SUPERFAMILY Protein kinase-like (PK-like) 545 834 IPR011009 -
Bva12g00428 874 SUPERFAMILY L domain-like 376 478 - -
Bva12g00428 874 Gene3D Transferase(Phosphotransferase) domain 1 640 854 - -
Bva12g00428 874 Pfam Malectin-like domain 30 358 IPR024788 -
Bva12g00428 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Bva12g00428 874 Pfam Protein tyrosine and serine/threonine kinase 567 834 IPR001245 GO:0004672|GO:0006468
Bva12g00428 874 Gene3D - 204 359 - -
Bva12g00428 874 ProSitePatterns Protein kinases ATP-binding region signature. 571 592 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00428 Bva-Chr12 6080418 6084792 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00428 6 874 Receptor kinase-like Gene Family AT2G19210 47.019 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00428 Malectin_like 1.1e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00428 - - gmx:100785345 944.495