Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00426 ATGATAGCTCTCAACAATGATATGTATATCACTGAATATGGATCATTGGCAAAAATTGAACGGGAGGATTTAGGTTCAACTGAAGAATACAGGTACCCTGATGATGTCTATGATCGCTTTTGGGACTGGGATGTGGATGAAGATGTCTGGAACACATTAGATGTTTCGATTCCTGATGATTCCTTAAAGAACAACAATTACAAACTACCTAAAATTGTAATGAGCACCTTGGTTACACCTGTTAATGCTAGTTCTCCTTTGTCCTATTCCTGGACATCAAGAAATGCAAGTGACAAATACTATGTTTATTTGTACTTTGCTGAGCTCCAACAGTTAGCAAAGAATGAGACAAGATCATTCAATGTCATCATCAATGGGCAGCCTCAAAATGCAACTATTGTACCACAGTACCTAAGCGTAGACACTTACAGTAGCAAGTCAGCAATTAGTGgagaaagttttaaaattcttcttgTGAGGACTGATGATTCAACCCTTCCTCCAATCTTAAATGcaattgagatttataaaGTGAAAGAGTTTCCACTACCAGAAACAGACAGAGAAGATTATGATGCAATTACAAGAATCCAATCAACTTATGGGTTGACAAAAAATTGGCAAGGAGATCCATGCAGCCCTATAGAATTCTTGTGGGATGGTCTAAATTGTACTTATGATGGTTATAATTTCCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGACAGGGACAATAGCACATTCCATCTCTGACCAAGTTGGAGAAGTTGTGATGCCTATGGTTCTGTCACAATTAGAGTTCTTGAAGACTCTaaatctagaaaataataatcttaCAGGTCCACTTTGCCCTGAACTGATTGAAAATCAAAAAGGGGTATATTGTCAATCAGTTGTCACAGCACCATTCTGGGTCCttaagagaagaaaaccaaaacCAGATACGACAATAGAAAAGAATCCAGGTGACACATTTATGGAAATCCAGAAACGacaatattcatattttgatCTCATTAAGATCACCAACAACTTTGAAAGGGTTCTTGGAAAAGGTGGATTTGGAACAGTTTACTATGGCATTATTGATGATAAACAAGTAGCCGTGAAGATGCTTTCTCCGTCCTCAGCTCAAGGTTATCAAGAATTTCAAGCCGAGGTTAAACTTCTGATGACAGTTCATCATAGAAACTTGACTTCCCTTATAGGGTATTGCAATGAAGAAACCAACAAAGGGCTTATTTATGAGTACATGGCTAATGGAAACTTACAAGAGCACCTTTCAGGTATGCACAGCAAAGCAAGGTTAATAACATGGGAAGACCGACTTCGGATATCGATTGATGTAGCCCATGgATTGGAGTACCTGCATAATGGTTACAAGCCACCTATAATACATAGAGACATAAAATCTACAAATATCTTGTTGAATGAATGTTTCCAAGCAAAATTATCAGATTTTGGTCTATCCAAAACTATGCCATCATCAGAGGGCGGAAATCAGTTGTCAAGTCTCGTTGGTGGAACCCCAGGTTATGTGAACCCTAAAAGCTCTGTCTGGAAAGCAGTAGAACTAGCAATGGCTTGTCTATCACTATATCCCAAGAGAAGGCCAACTATGAGTGAGGTAGTGATTGAGCTTAACGAATGTTTGGCAACAGTACTACCTCGGACAACTATAGTGGTGTTAGTTCAACAGGGCTA 1712 0.3697 MIALNNDMYITEYGSLAKIEREDLGSTEEYRYPDDVYDRFWDWDVDEDVWNTLDVSIPDDSLKNNNYKLPKIVMSTLVTPVNASSPLSYSWTSRNASDKYYVYLYFAELQQLAKNETRSFNVIINGQPQNATIVPQYLSVDTYSSKSAISGESFKILLVRTDDSTLPPILNAIEIYKVKEFPLPETDREDYDAITRIQSTYGLTKNWQGDPCSPIEFLWDGLNCTYDGYNFPRITTLNLSSSGLTGTIAHSISDQVGEVVMPMVLSQLEFLKTLNLENNNLTGPLCPELIENQKGVYCQSVVTAPFWVLKRRKPKPDTTIEKNPGDTFMEIQKRQYSYFDLIKITNNFERVLGKGGFGTVYYGIIDDKQVAVKMLSPSSAQGYQEFQAEVKLLMTVHHRNLTSLIGYCNEETNKGLIYEYMANGNLQEHLSGMHSKARLITWEDRLRISIDVAHGLEYLHNGYKPPIIHRDIKSTNILLNECFQAKLSDFGLSKTMPSSEGGNQLSSLVGGTPGYVNPKFYINK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00426 524 PANTHER PUTATIVE-RELATED 301 523 - -
Bva12g00426 524 PANTHER PUTATIVE-RELATED 4 294 - -
Bva12g00426 524 Gene3D Transferase(Phosphotransferase) domain 1 421 524 - -
Bva12g00426 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Bva12g00426 524 ProSitePatterns Protein kinases ATP-binding region signature. 352 373 IPR017441 GO:0005524
Bva12g00426 524 Gene3D Phosphorylase Kinase; domain 1 328 420 - -
Bva12g00426 524 PANTHER OS07G0107800 PROTEIN-RELATED 301 523 - -
Bva12g00426 524 PANTHER OS07G0107800 PROTEIN-RELATED 4 294 - -
Bva12g00426 524 Gene3D Ribonuclease Inhibitor 192 296 IPR032675 -
Bva12g00426 524 Pfam Malectin-like domain 3 178 IPR024788 -
Bva12g00426 524 Pfam Protein tyrosine and serine/threonine kinase 348 497 IPR001245 GO:0004672|GO:0006468
Bva12g00426 524 SMART serkin_6 346 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00426 524 Gene3D - 23 179 - -
Bva12g00426 524 SUPERFAMILY Protein kinase-like (PK-like) 325 522 IPR011009 -
Bva12g00426 524 ProSiteProfiles Protein kinase domain profile. 346 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00426 524 SUPERFAMILY L domain-like 202 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00426 Bva-Chr12 6070185 6074046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00426 4 524 Receptor kinase-like Gene Family AT2G19210 41.594 3.43e-143 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00426 Malectin_like 2.6e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00426 - - gmx:100170722 563.148