Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00424 atgaaaactcacCAACAACTGAGACAGCCGCCATATGTGGTGGTTTGGGGTTGCCGGAGCTCCTTGCCACATCCTCTGCCTGCGCCGGTGTTGGTGGGTGGCCGGGAAAGCTTCTCACCAGTGGAAATGGCAGTAGCAGCAGCAGCTCTTGCTGTTCTGAACCAAGCTCAAGATCAATCAGAACTGAGGCCTCTCAACAATGATACATATGTCACTGAATCTGAATCATTGGCACTTTGGAAGCGGGTGGATTCAGGTTCAACTAAAGCATTcagGTACAATTATGATGTCTATGATCGCTTTTGGTCCGCGGATGTGGATGTGGGTGAAAATGATCGGACATCATTAAACGTTCCAATTCGTGCCGGCTCCTTAAGGACCAACAATTTCCACCCACCTGAAATTGTAATGAGCACCTTTATTGCACCAGCAAATGCTAGCAGTTCATTGTGCTTTTCCTGGACATCAACAAATGCAAGTAACAAATACTATGTTTATATGCACTTTGCTGAGCTCCAAGTGTTAGCAAAGAATGAGACAAGAGCATTCAACATCACCCTCAATGGCCAGGTTCGGTATGGAAATCTTGTACCAAAGTATCTCAGCGTAGACACATATCGTACCAAGTCAGCAATTAGTGGAGAAAGATTTGAATATCGTCTTGTGAGGACTGAGAATTCAACCCTTCCTCCAATCTTAAACGCAATTGAGATTTATACAGTAAAAGAGCTTCCACAATTAGAAACAGACCAAGAAGATTATGAAGCAATTGCAAGCATCCAGTCAACTTATGGGTTGAGAAAAAATTGGCAAGGAGATCCATGCAGCCCTATAGAGTACTTGTGGAATGGTTTAAATTGTACTTATGATGGTTTCAATTCCCCTAGAATCACAACGGTGGATTTATCTTCAAGTGGATTGAGAGGGAAAATAGATCCTTCCATCTCCAAGCTGACCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAATGGAGGAGTGCCAGCATTTTTGTCTCAATTTGAATTCTTGAAGACCCTaaatttagataataataaCCTTACAGGTTCACTTCCCTCTGAactaattgaaaaatcaaaaagcgGTACATTGTCATTAAGTGTGAGCCAAAATCCATATCTATGTGATTCTCCTGCATGCACAGACATCAAGAACGACAACAACGAAGGCAAGAATGTTACTGCTCCAATAGTAGCGTCAATTTGTGggattttgatctttcttgtAGTTGTGGCAGCTCTCTTCTGGATCTTTAAGAGGAGAAAACCAAAACATATGACAGTAAGAAGGGATAGAATTGACACATTAATGAAAAAACAGCAACGGCAATATTCATATTCTGATATCATCAACATCACCAACAACTTTGATATAATTCTTGGCAAAGGTGGATTTGGAACAGTTTATCTTGGATTTATTGATGATATTCAGGTAGCCGTGAAGATGCTTTCTCCATCATCAGCTCAAGGTTATCAACAATTCCAAGCGGAGGTTAAACTTCTCATGACAGTTCATCATAGAAACCTGACTTCTCTGATAGGGTATTGCAATGAAGAAACCAACAAGGGACTCATCTATGAGTACATGGCTAATGGAAATTTACATGAGCATCTTTCAGGTATACACAGCAATGCAAAATTCTTGACGTGGGAAGATCGGCTTCGGATATCTATTGATGCAGCCCAAGgATTGGAATACCTACATAATGGTTGCAAACCATCTATAACACACAGAGACATAAAATCTACAAACATTTTGTTGAATGAACATTTCCAAGCaaaaatttctgattttggtCTATCCAAAACTATGGTAACAACAGAAGGGGGAACTCAGTTGTCTAGTCTTGTTGGTGGTACTCCAGGTTATCTAGACCCTGAATTCtacataacaaataaattaacagaaaagagtgatgtttatagttttggagttGTTCTTTTGGAGTTAATCACGAATCAGCAACCAGTGTTGATAACAAGAAATCTTGAGAAGATTCACATAAGCCAATGGGTTAATTCCTTGGTTAAGAATGGGGATATAAAGAAGATTGTTTACTCCGGGCTACATGGAGAATTTGACAGTAACTCTACCTGGAAAGCAGTTGAACTAGCTATGGCTTGTGTGTTACCAAATTCTTCAGGAAGGCCAACTATGAGCGAGGTAGTGATTGAGCTTAAGGAATCTTTGGCAACAGCACTACCTCAGGCAAACCGAGGTGGTGTTAGGGCAACGGGATTAGAGGAACAGCAGATAATGAATGTGTCTGTAGATTCTACTCCCATGGCAAGTCATGTAAAATTCTTCAATGCCATTGATCTTCCATCCACTATAGCATCTTCTACTAGGGATAACTTGGGAATGCCCTTCAATTCATA 2402 0.3876 MKTHQQLRQPPYVVVWGCRSSLPHPLPAPVLVGGRESFSPVEMAVAAAALAVLNQAQDQSELRPLNNDTYVTESESLALWKRVDSGSTKAFRYNYDVYDRFWSADVDVGENDRTSLNVPIRAGSLRTNNFHPPEIVMSTFIAPANASSSLCFSWTSTNASNKYYVYMHFAELQVLAKNETRAFNITLNGQVRYGNLVPKYLSVDTYRTKSAISGERFEYRLVRTENSTLPPILNAIEIYTVKELPQLETDQEDYEAIASIQSTYGLRKNWQGDPCSPIEYLWNGLNCTYDGFNSPRITTVDLSSSGLRGKIDPSISKLTMLEKLDLSNNSLNGGVPAFLSQFEFLKTLNLDNNNLTGSLPSELIEKSKSGTLSLSVSQNPYLCDSPACTDIKNDNNEGKNVTAPIVASICGILIFLVVVAALFWIFKRRKPKHMTVRRDRIDTLMKKQQRQYSYSDIINITNNFDIILGKGGFGTVYLGFIDDIQVAVKMLSPSSAQGYQQFQAEVKLLMTVHHRNLTSLIGYCNEETNKGLIYEYMANGNLHEHLSGIHSNAKFLTWEDRLRISIDAAQGLEYLHNGCKPSITHRDIKSTNILLNEHFQAKISDFGLSKTMVTTEGGTQLSSLVGGTPGYLDPEFYITNKLTEKSDVYSFGVVLLELITNQQPVLITRNLEKIHISQWVNSLVKNGDIKKIVYSGLHGEFDSNSTWKAVELAMACVLPNSSGRPTMSEVVIELKESLATALPQANRGGVRATGLEEQQIMNVSVDSTPMASHVKFFNAIDLPSTIASSTRDNLGMPFNS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00424 800 ProSitePatterns Protein kinases ATP-binding region signature. 468 489 IPR017441 GO:0005524
Bva12g00424 800 Gene3D - 79 242 - -
Bva12g00424 800 SMART serkin_6 462 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00424 800 Pfam Protein tyrosine and serine/threonine kinase 467 733 IPR001245 GO:0004672|GO:0006468
Bva12g00424 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Bva12g00424 800 SUPERFAMILY Protein kinase-like (PK-like) 443 733 IPR011009 -
Bva12g00424 800 Gene3D Phosphorylase Kinase; domain 1 444 536 - -
Bva12g00424 800 SUPERFAMILY L domain-like 268 375 - -
Bva12g00424 800 CDD STKc_IRAK 468 736 - -
Bva12g00424 800 CDD TM_EGFR-like 405 433 - -
Bva12g00424 800 Gene3D Ribonuclease Inhibitor 254 377 IPR032675 -
Bva12g00424 800 PANTHER PUTATIVE-RELATED 61 771 - -
Bva12g00424 800 ProSiteProfiles Protein kinase domain profile. 462 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00424 800 PANTHER OS07G0107800 PROTEIN-RELATED 61 771 - -
Bva12g00424 800 Pfam Malectin-like domain 61 241 IPR024788 -
Bva12g00424 800 Gene3D Transferase(Phosphotransferase) domain 1 537 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00424 Bva-Chr12 6057539 6063488 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00424 61 771 Receptor kinase-like Gene Family AT2G19210 47.214 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva12g00424 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00424 - - gmx:100781785 833.943