Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00421 ATGCATGACATGCTTCAAGAAATGGGTAAGAGTGTTGTTATAAATGAGTCTCTTAATGAACCTGGAAAGCGCAGTAGATTATGGTTGCAAAATGATATTGACGACgtattgacaaaaaataagGGAACCAAGGATATTCAAAGCATTGCTATGAACTTGTTACCAAGTAGGCGATATAAAGCTTGTTGGGATCCTAAAGCTTTTTTGAAGATGTGTAATCTAAAATTGTTGATGCTGGAAAACATAGATCTTCCACTTGGTCTCAATTGTCTCTCAGAAGGATTAAGATATATTGAATGGATTGAATTTCCATTAAAAGAATTGCCGCTTGGTGAACAACTTGATAATCTTGTTGAACTTATAATGCATCATAGCAAAATTCAGCAACTATGGCATGGAACAAAGTTTTTCGGAAAGCTGAAGCTCATTGATTTGAAGGGTTCAAGGGATCTGATTCGGTTTCCTTGTGTTGATGGAATTCCATGTCTTCAACAGTTGGTTCTTGAAGGCTGTGAAAACCTTGTTGAGGTTCACCAATCCGTTGGACTGCACAAAAAGCTTGTGGTATTGAATTTGAGATATTGTGTAAATCTTAAAATCCTTCCACGGAAATTGGACATGGATTCTTTGAAGGAGTTCATTCTTTCAGGTTGTTCAAAAGTTAGAAAGCTTCCTGAGTTTGGGGATAATATGAGATTTCTCTCAATGCTTGATTTACGAGATTGCAAAAATCTTGTTTGCCTTCCATATTCCATTTATAAGTTGAAGTCTCTTAAAACTCTCAATACTTCTGGCTGTAGTAAATTTTCTAGGCTGCCAGATAATTTGGCTGAAAATGAGGTTTTGGAGGAGATTAATGTGAAAGGAACTGCTATAAGAGAAATACCTTCCTCCATTGTTCAGTTAaagtatcttaaaaaattatcttttggtGGACATCAAGCATCAGAATCCAACTGGTGGAACTTAGCTTTTCCCTTTGAATGGAAGCTTCAGAAGAATTCTGTTTCCTCAGGCATGAACATGATGTTTCCTCCTTTGTCGCGCTTTTATCTTTTGGAAGAATTAGATTTAAGTTACTGTAATCTTAATGATGAATCACTTCCTCTTGATCTTGGCTGCTTATCATCATTGAAGAAGTTAGATCTAAGTGGGAACAACTTTGCCACACTACCCACTAGTTGTATTGCTAATCTTTCCAAGTTATATTCTCTTAACCTAGATTGTTGCCAAAGGCTTGAGTCTGTGCCTATGCTTCCACCACATGTAGACCGGTTGTATGGAAGAAATTGCGCTTCATGGCAACCATTTTCAGATCCTCAGGAGCTTTGTGATTATTTTGCTTCACACCAACCGATGAGATTTCGGTACGAACCCTTTTTGATTATTCCAGGAAGAGAAATTCCATCATGGTTCTGCAATCAAGATTACTTTAATATGGAGATAAGTAAACCATTTCAATGGGAAATAGTCATCAAAAGTTCCATTGCCAGTCGCAAAACAGTTTCACCTAGTGAATGTGATACATTGATATCAATATTAGTAGACATCCCTGATTATTGTCTTTCAAGTGAATGGTGGGGAATTGTTGTCTGCCTTGTCTTAGAAAATCAGTTTCCTCCTTCTCGTTGGTGGATTGCTTTGCTTCATTGGATTTGTAAAACTCCTGGAGCTGAATTGCCCATCTCATCAGGTGCCCTACATGGGGGTTGGATTGAAGAGTTTAGAAACACTCACTTgtgtattttcttattgagAGGTGATGATCAAAATATTCAGCGGCATCTAAGAGGTGACCACAACCAACTtcagttattattttatgttgaacCTATTTCTGAAGACGACGAAGCTGATGATCCTGGCTTCTTGAACATAAGCAAGTGTGGATGCCGTGTGTTGTGTACGGATGATTTGGAAGTGTGGGGCCAAGCAATGAGTGAAAGGAAACAAGGTAATAACATTGAGATGCCTTCCAGCAGTCCCAACAAATCGAGGGtaagagaaaatattgttgATGACAATCAATGTGCTGAGGGATTTGAGGGGGAATATGCAAATACATCAAATGCAGAagtaaaacgaagaaaacttGGATA 2099 0.3649 MHDMLQEMGKSVVINESLNEPGKRSRLWLQNDIDDVLTKNKGTKDIQSIAMNLLPSRRYKACWDPKAFLKMCNLKLLMLENIDLPLGLNCLSEGLRYIEWIEFPLKELPLGEQLDNLVELIMHHSKIQQLWHGTKFFGKLKLIDLKGSRDLIRFPCVDGIPCLQQLVLEGCENLVEVHQSVGLHKKLVVLNLRYCVNLKILPRKLDMDSLKEFILSGCSKVRKLPEFGDNMRFLSMLDLRDCKNLVCLPYSIYKLKSLKTLNTSGCSKFSRLPDNLAENEVLEEINVKGTAIREIPSSIVQLKYLKKLSFGGHQASESNWWNLAFPFEWKLQKNSVSSGMNMMFPPLSRFYLLEELDLSYCNLNDESLPLDLGCLSSLKKLDLSGNNFATLPTSCIANLSKLYSLNLDCCQRLESVPMLPPHVDRLYGRNCASWQPFSDPQELCDYFASHQPMRFRYEPFLIIPGREIPSWFCNQDYFNMEISKPFQWEIVIKSSIASRKTVSPSECDTLISILVDIPDYCLSSEWWGIVVCLVLENQFPPSRWWIALLHWICKTPGAELPISSGALHGGWIEEFRNTHLCIFLLRGDDQNIQRHLRGDHNQLQLLFYVEPISEDDEADDPGFLNISKCGCRVLCTDDLEVWGQAMSERKQGNNIEMPSSSPNKSRVRENIVDDNQCAEGFEGEYANTSNAEVKRRKLG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00421 699 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 236 IPR044974 GO:0006952
Bva12g00421 699 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 236 - -
Bva12g00421 699 Gene3D Ribonuclease Inhibitor 63 206 IPR032675 -
Bva12g00421 699 Gene3D Ribonuclease Inhibitor 207 281 IPR032675 -
Bva12g00421 699 SUPERFAMILY L domain-like 1 417 - -
Bva12g00421 699 Gene3D Ribonuclease Inhibitor 282 431 IPR032675 -
Bva12g00421 699 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 234 445 IPR044974 GO:0006952
Bva12g00421 699 Pfam Leucine Rich Repeat 116 135 IPR011713 -
Bva12g00421 699 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 234 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00421 Bva-Chr12 6023804 6029050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00421 1 310 WRKY Transcription Factor Family AT4G12020 36.127 7.27e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00421 - - vun:114195147 547.74