Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00419 ATGGGGAAGAATGAATTTCTCACACCAAAAGCAATTGCTAATAGAATCAAGGCAAAAGGGCTGCAGAAGCTTAGATGGTACTGCCAAATGTGCCAGAAGCAATGCAGAGATGAAAATGGGTTTAAGTGCCATTGTATGAGTGAAGGGCACCAGCGTCAGATGCAAATATTTGGACAAAACCCACATCGAATTGTTGAGGGTTATTCTGAGGAGTTTGagcatttatttttggagCACATGAAGCGCAGTCACCGGTTCAGCCGTGTAGCAGCAACTGTAGTTTACAATGAATATATAAGTGATAGGCACCATGTGCATATGAATTCCACTGAGTGGGCAACACTCACCGACTTTGTTAAGTACTTGGGTCGGACTGGAAAATGTAAGGTTGAAGAAACGCCCAAGGGTTGgtttattacatatatagataGGGATTCAGAGACCCTTTTCAAAGAGAGGATGAAGAATAAGAGAATTAAGGCAGATATGGTGGATGAAGAGAGGCAAGAGAAGGAGATCAGGAGACAGATTGAAAAAGCTGAGATGCTGATGCCGCCAGCTAGTGCAGGGTCTGATCAGGAATTGCAGGCTGAGCCTCCAAGAGAATTGAAATTGGAAGATGGACTGAAGGTTGGATTTTCTCTTGGATCGTCAACTAAACCTCCTGTAACCAAGGACAAAAAAGAGGCTTCAAGGGTCGTATTTGATGAGGCTGAGGATGAGAGAAATGAGGAAAGGAATCCTGGAGGTAATTTGAAGAGGAAAATTGATAGTGAAGAGAGGAAAGGAGGAAAATCAACTTTGGAAGAATTGATGaaggaggaagagaagaaaaaagagaaaattaacagGAAGGACTACTGGTTGCATGAAGGGATTGTTGTTAAAGTCATGAGCAAAGCATTGGCTGAGAAGGGCTATTACAAGCAAAAGGGAGTTGTGCTAAAGGTGATCGACAAGTATGTTGGGGAAATAGAAATGCTTGAAAGCAAACATGTGCTTCGAGTTGACCAAGCCGAACTTGAAACTGTGATTCCACAAATTGGTGGCCTTGTGAAGATAGTAAACGGGGCATATCGCGGATCTATTGCAAGGTTGTTGGGGGTCGATACAGATCACTTTTGCGCCAAGGTGCAGATAGAGAAAGGTGCATATGATGGCAGGGTACTGAAAGCTGTAGAATATGAGGATATTTGTAAGATAGCCCAGTG 1211 0.4121 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFEHLFLEHMKRSHRFSRVAATVVYNEYISDRHHVHMNSTEWATLTDFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEERQEKEIRRQIEKAEMLMPPASAGSDQELQAEPPRELKLEDGLKVGFSLGSSTKPPVTKDKKEASRVVFDEAEDERNEERNPGGNLKRKIDSEERKGGKSTLEELMKEEEKKKEKINRKDYWLHEGIVVKVMSKALAEKGYYKQKGVVLKVIDKYVGEIEMLESKHVLRVDQAELETVIPQIGGLVKIVNGAYRGSIARLLGVDTDHFCAKVQIEKGAYDGRVLKAVEYEDICKIAQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00419 403 MobiDBLite consensus disorder prediction 213 271 - -
Bva12g00419 403 Gene3D - 60 160 IPR038254 -
Bva12g00419 403 PANTHER BNAA05G13760D PROTEIN 1 402 - -
Bva12g00419 403 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Bva12g00419 403 Pfam KN17 SH3-like C-terminal domain 284 337 IPR041330 -
Bva12g00419 403 Gene3D - 292 345 - -
Bva12g00419 403 SMART Kin17_mid_2 52 178 IPR019447 -
Bva12g00419 403 MobiDBLite consensus disorder prediction 180 199 - -
Bva12g00419 403 Gene3D - 346 402 IPR014722 -
Bva12g00419 403 CDD KOW_KIN17 348 401 IPR041995 -
Bva12g00419 403 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 402 IPR037321 -
Bva12g00419 403 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Bva12g00419 403 Coils Coil 156 183 - -
Bva12g00419 403 Coils Coil 265 285 - -
Bva12g00419 403 MobiDBLite consensus disorder prediction 222 271 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00419 1 402 C2H2 Transcription Factor Family AT1G55460 70.913 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00419 K13102 - gmx:100785931 683.715