Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00395 ATGGACATAGATTCATTCCCCAGAAAcccaaagaaagaagaacaaaatcTATCGCATACAATCTCAACCGTCAAATCTTACGCAGATGAAGAATTCAAGAGACTGGATGACCTAGAAGGTGAAACACTGCCACAACACAAAGCTTATTGCTCTGAGCTTAACTGGGATTTCATGGAATCGCAGGGATTTTCTGAAACTGGTTATGGAGCagaaaatgatgatgatgaacaGAGAGAGCAGCTGAAGgtgataaagaaagaaaatgttgaatttttgGAGGAAGATTATGaggagaagatgatgatgactTTGAACTTGAACTTGAATCATCAAGAAGTTCTGGATGCTTGGTCTAATCGAGGGTCTCTTTTGGCTGATGATTATTCGCTATCTATGGCATCTTACTATATGGGAGAAGTGCCAATATcggaagaagagaaagcaagAAGGGAAGCAAGTGTTCTTAGGTATAGAGAGAAGCGCCAGAGTAGATTGTTCTCGAAGAAGATCAGATACCAAGTTCGCAAACTTAATGCAGATAAAAGACCCAGAATCAAGGGTCGCTTTGTGAAGAGAGAATG 581 0.3356 MDIDSFPRNPKKEEQNLSHTISTVKSYADEEFKRLDDLEGETLPQHKAYCSELNWDFMESQGFSETGYGAENDDDEQREQLKVIKKENVEFLEEDYEEKMMMTLNLNLNHQEVLDAWSNRGSLLADDYSLSMASYYMGEVPISEEEKARREASVLRYREKRQSRLFSKKIRYQVRKLNADKRPRIKGRFVKRE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00395 193 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g00395 193 Pfam CCT motif 150 192 IPR010402 GO:0005515
Bva12g00395 193 ProSiteProfiles CCT domain profile. 150 192 IPR010402 GO:0005515
Bva12g00395 193 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 5 192 - -
Bva12g00395 193 MobiDBLite consensus disorder prediction 1 15 - -
Bva12g00395 193 PANTHER CCT MOTIF FAMILY PROTEIN 5 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00395 Bva-Chr12 5882467 5884128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00395 97 192 C2C2-CO-like Transcription Factor Family AT1G25440 43.220 1.57e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva12g00395 CCT 3.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00395 - - zju:107411546 200.29