Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00394 ATGTCGGACAAGGTGGTGTGCGTCACCGGAGCCAGCGGCGCCATCGGATCATGGCTCGTCCGTCTTCTACTCGATCGCGGTTACACCGTCAACGCCACCATCCAAAATCTCGAGGATGAAAATGAGACGAAGCATTTGGAAGCAATGGAAGAAGCAAAGGCGCGTCTCCGTCTATGTGAGATGGATCTACTTGATTATGACTCCATCGCTGCCGCCGTAAAAGGCTGTGCCGGAGTTTTCCACCTCGCCTGTCCTAACATCATTGGTCAAGTGAAAGATCCCGAGAAGGAAATTCTGGAGCCGGCGATTAGAGGGACGGTGCATGTGCTGAAGGCGGCAAAGGAAGCGGGGGTGCAGCGCGTGGTCGCCACGTCGTCGATCTCAGCCATTATTCCCAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAGGATTGCTGGACAGACCTTGAATACTGCAAGCAGAAAGGGCTATACTATCCAATTGCGAAAACGCTGGCGGAGAAAGCAGGGTGGGAATTCGCCAAGGAAACCGGTTATGACGTTGTGATGATAAATCCAGGCACGGCATTGGGTCCTCTCCTCCCACCACGCATCAATTCAAGCATGGCTGTGCTTGTTGAAGTTCTCAAAGGATCCACAGAAACATACGAGGAATTCTTTATGGGAATGGCTCATTTTAAAGACATAGCCATGGCTCATATTTTGGCTTTTGAGAACAAAAATGCTGCTGGAAGGCATTTGTGTGTTGAGGCTATTCGTCACTGGGGTGACTTTGTGGCAAAGGTTGCTGAATTGTACCCTGAGTATAATGTCGCCAAGCTACCAAAGAATACACAACCTGGATTATTGAGATCAAATGATGCAGCCAAGAAGTTGATGGATTTAGGTCTAGAGTTCACTCCCATTGATCAAATTATCAAGGATGCTGTGGAGAGTTTGAAGAGTAAGGGATATGTTTG 962 0.4875 MSDKVVCVTGASGAIGSWLVRLLLDRGYTVNATIQNLEDENETKHLEAMEEAKARLRLCEMDLLDYDSIAAAVKGCAGVFHLACPNIIGQVKDPEKEILEPAIRGTVHVLKAAKEAGVQRVVATSSISAIIPSPNWPADKIKGEDCWTDLEYCKQKGLYYPIAKTLAEKAGWEFAKETGYDVVMINPGTALGPLLPPRINSSMAVLVEVLKGSTETYEEFFMGMAHFKDIAMAHILAFENKNAAGRHLCVEAIRHWGDFVAKVAELYPEYNVAKLPKNTQPGLLRSNDAAKKLMDLGLEFTPIDQIIKDAVESLKSKGYV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00394 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 4 312 - -
Bva12g00394 320 CDD FR_SDR_e 6 298 - -
Bva12g00394 320 Pfam NAD dependent epimerase/dehydratase family 6 240 IPR001509 -
Bva12g00394 320 Gene3D - 1 320 - -
Bva12g00394 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 312 - -
Bva12g00394 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00394 Bva-Chr12 5872553 5876692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00394 4 320 Monolignol Biosynthesis Gene Families AT5G58490 65.931 8.57e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00394 - - gmx:100806281 538.11