Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00386 atggccACCGACGCCACTGCCAAATTCCAAAACCCGGACTTTCGCCCGGTTCCACAGCCCCCAGATTTCCATCCAGAAGTGACGGTGTCTGCCCACGACGGCCTCCAGTTCTGGCAGTTTATGATCGCCGGCTCTGTCGCTGGCAGCGTTGAACATATGGCCATGTTCCCCGTTGACACCGTGAAGACCCATATGCAAGCTCTCGGGTCATGCCCGATTAAGTCGGTCAGCGTTCGACATGCCCTTCAATCAATTATGAAAACCGAGGGTCCTTCTGCTCTGTACCGTGGTATCGGCGCCATGGGTCTCGGAGCTGGACCTGCACATGCTGTGTATTTTTCGGTTTATGAGGTTTGTAAGAAATATTTCTCCCATGGGAATCCCAATAACTCCATGGCACACGCCATTTCAGGGGTATGCGCTACTGTTTCTAGTGATGCTGTGTTTACGCCTATGGATATGGTTAAGCAAAGGTTGCAATTGAGTAACAGTGGTTATAAGGGTGTTTGGAATTGTATAAAGAGGGTGTTGAGTTCGGAGGGATTAGGAGCATTTTATGCATCGTATAGGACTACGGTTTTGATGAATGCGCCATTTACAGCAGTgcatttttctaaatatgaGGCTTCTAAAAAGGGTCTGATGGGGATTTCACCGGAGACTGCTGATGATGAACGTTTGGTTGTTCATGCAACAGCTGGAGCTGCTGCTGGGGCTTTGGCTGCTGCCGTCACAACGCCATGTGATGTTGTTAAAACTCAATTGCAGTCTTCTTTGGgatcaaacaaaatagaagGCATAGTAAAGGGCCTCTTGAGAGGCTCAGAGTCACCTTGTACAAAGGATTTGATAGCTTCTAACTGTGAAGCTATGGAGGGTGTCTGCGGCTGCGATAGATTCAAAAGTGGTTCAATTAGTGATGTTATAAAAACAATTGTGAAGAAGGATGGATATAAAGGGCTCATGAGGGGATGGATTCCAAGGATGCTATTCCATGCTCCTGCCGCAGCAATCTGTTGGTCTACATATGAAGCTGGAAAGAGCTTTTTCCAGGAATTAAATCACAATAAGGATGGTTG 1079 0.4597 MATDATAKFQNPDFRPVPQPPDFHPEVTVSAHDGLQFWQFMIAGSVAGSVEHMAMFPVDTVKTHMQALGSCPIKSVSVRHALQSIMKTEGPSALYRGIGAMGLGAGPAHAVYFSVYEVCKKYFSHGNPNNSMAHAISGVCATVSSDAVFTPMDMVKQRLQLSNSGYKGVWNCIKRVLSSEGLGAFYASYRTTVLMNAPFTAVHFSKYEASKKGLMGISPETADDERLVVHATAGAAAGALAAAVTTPCDVVKTQLQSSLGSNKIEGIVKGLLRGSESPCTKDLIASNCEAMEGVCGCDRFKSGSISDVIKTIVKKDGYKGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQELNHNKDG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00386 359 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 292 357 - -
Bva12g00386 359 Gene3D Mitochondrial carrier domain 19 218 IPR023395 -
Bva12g00386 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Bva12g00386 359 PANTHER MITOFERRIN-1-RELATED 1 257 - -
Bva12g00386 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 349 IPR018108 -
Bva12g00386 359 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 257 - -
Bva12g00386 359 SUPERFAMILY Mitochondrial carrier 33 344 IPR023395 -
Bva12g00386 359 Pfam Mitochondrial carrier protein 226 352 IPR018108 -
Bva12g00386 359 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Bva12g00386 359 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Bva12g00386 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Bva12g00386 359 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Bva12g00386 359 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Bva12g00386 359 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Bva12g00386 359 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Bva12g00386 359 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Bva12g00386 359 PANTHER MITOFERRIN-1-RELATED 292 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00386 Bva-Chr12 5840532 5844221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00386 1 354 Chloroplast and Mitochondria Gene Families AT2G30160 68.524 3.80e-170 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00386 K15113 - qsu:112000477 541.576