Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00380 ATGGGTAGGGTTTTACTTGCGCGACGTTTGGTGCAATCTTCCAATGGATCAATTCGATGGCCCTTTCATGTTTCCACAGACGCAGCAAAAAATTATCAGTTTCCTCCTGTGGTGTGCGACTCTATATACACAGAGACTGCTGGGATCTTCTATGGCGAAAACCCTTTTAACTACACCTTCTCATCGGTGTTGATACAGTTTTTTCTTATTGTCTTAGCCATTCACATTGTTAGGTTGCTTCTTAAGCCTCTCAAACAGCCTCGAATCGTTTGTGAGATCATTGGTGGTATTATCGTTGGATCTTCCTTTCTAAGACGCAACAATGCCTTTTACAACATGTTTTCCGAAACTGCGCAATTCGTAGTGAAAAACATTGGAATCGTTGGATTCATGTTCTTCCTCTTCGTCTCCGGTGTCAAAATGGATGCTGGCTTCGTAAGAAAACCAGCGAAAAAACATGTATACATTGCCTTGATTGGTATAGTCATTCCCACCATGGCAGTGATTACTGTGGCAATAATCATGAGGAAAAAACTTGACAGCAATCTCAgaacaatttcttctctaggAGGGATTGCAAGTTACCTGGGAATCACTGCATTTCCTGTACTATACAATATCCTCAAGGAGCTTAATCTTCTAAGTTCTGACGTGGGGCGAACGGCACTATCCACAGCCATGGTTGGTGATGCAATGGGTTCAATAACCATTATTGCATTTGAAGCTGGGAAGCAAGGGGAAACAGGAGCTATAAGAGCCTTGtggtttttgatttctttggtACTTTTGGTGGCATTCATTCTAATTTGCTTGGGGAAATTAATGAGATGGATCGTTGAGAGAACCCCACAAGGTGCACAAGCTGATCAATCTTATGTTGTGGGCATTTTGTTGGGGGTTTTGGTTATGGGGTTTGTGACTGACATGCTTGGCATAGCCATTGCTAATGGGTCATTGTGGCTAGGGTTGATAATACCAGATGGTCCTCCACTGGGGTCAACAATGGTGGAGAAGACTGAAACTATTACCATGGAGTTTCTTAtgccattttcatttcttatggTGGGATTTTACACTGATGTGAGTGCCATGAGAGAGTTTGGTTGGTCCAATTTGTCACCACTTTTTGCCATGGTGTTAACTGGGTACTTGACCAAATTGCTTTCAACTTGGATTGCCACTATCATATGGAAAATGCCAATGAAAGAAGGACTTGCCTTCAGCCTCATTATGAGCTTGAGAGGCCAAATTGAGCTTATATTGTTTGTCCATTGGATGGACAAGAagATGATAGGGAATCCGGGTTTCACCTTATTAGTGCTGATGACAGCTGCAATGACTGCAATTCTCACTCCTTTGATTTGCATACTCTATGATCCAACAAGGCCATACATGTTGAATGAAAGGAGAACCATCCAACATTCCCAACCAGACAAAGAACTCAACATAGTACTTAGCATTCTTGATCAACAAAGAATAAGTGGCATCATAGACCTACTTGAAGCTTCCAGTCCCACCATTACCAGTCCTTTCAATATCAAAGCTCTCCACCTAGTCGAGCTTGTTGGAAGCGCTTCCCCGGTTTTCATAGATCATGAACAACAAGAAGTCCCTCCCAAATATGAATTCCCAAGAACCATAAATTCCCTCAAGCATTTCCAAGAACTCAAGGGCACTGACTTCATCAAGCTCCATTTATTCACCTCAATTTCCCCAAGAAGAACTATGTACCAAGACATTTGTGAGCTTGCTCTTGAACACAAAGCTACCCTAATCATCTTACCTTTCCCCAAGAAAGCAATTTACAACATCGAAGGAACTCGAATAACAGAAGTAAGACCTAGAATCATGCACTCAAATGTCATTGCTCATGCTCCTTGTTCTGTTGCAATTCTTGTTGATAAAGGTATTATCAATCTTGAAGCTAACAACACGGGCCACTCGTACCGTTTTGTTGTTCTCTTTCTGGGAGGGCCAGATGCTAGGGAAGCACTTGTTTATGCAGATAGAATGGTTGGCAATGTCGAGGTGAATCTCACTGTCATAAGATTTCTTACTCACAATTGTGAAGGCGGGAGTGAAAAGGAGAGGAAGATTGATGATGAGGTTGTGACTTGGTTTTGGGTGAAGAATGAGTTGAATGGTAGAGTGGTTTATAGAGAAGTGGTGGTTGGCAGTGGAGAGGAAACAATTGCAGCAATCCAAGCTATGAATGATGGGTCTTATGATCTTTGGATAGTGGGAAGAAAACAAGGGATAAATCCAAATATTATTTCTGGGTTACGTGGTTGGAGTGAAACTCAAGAACTGGGACCTATTGGAGATTATATTTCCTTTGTAGATTTTAGTGGTTCAGCTTTAGTGATACACCAACAAATCACAAGAGGGTA 2390 0.4088 MGRVLLARRLVQSSNGSIRWPFHVSTDAAKNYQFPPVVCDSIYTETAGIFYGENPFNYTFSSVLIQFFLIVLAIHIVRLLLKPLKQPRIVCEIIGGIIVGSSFLRRNNAFYNMFSETAQFVVKNIGIVGFMFFLFVSGVKMDAGFVRKPAKKHVYIALIGIVIPTMAVITVAIIMRKKLDSNLRTISSLGGIASYLGITAFPVLYNILKELNLLSSDVGRTALSTAMVGDAMGSITIIAFEAGKQGETGAIRALWFLISLVLLVAFILICLGKLMRWIVERTPQGAQADQSYVVGILLGVLVMGFVTDMLGIAIANGSLWLGLIIPDGPPLGSTMVEKTETITMEFLMPFSFLMVGFYTDVSAMREFGWSNLSPLFAMVLTGYLTKLLSTWIATIIWKMPMKEGLAFSLIMSLRGQIELILFVHWMDKKMIGNPGFTLLVLMTAAMTAILTPLICILYDPTRPYMLNERRTIQHSQPDKELNIVLSILDQQRISGIIDLLEASSPTITSPFNIKALHLVELVGSASPVFIDHEQQEVPPKYEFPRTINSLKHFQELKGTDFIKLHLFTSISPRRTMYQDICELALEHKATLIILPFPKKAIYNIEGTRITEVRPRIMHSNVIAHAPCSVAILVDKGIINLEANNTGHSYRFVVLFLGGPDAREALVYADRMVGNVEVNLTVIRFLTHNCEGGSEKERKIDDEVVTWFWVKNELNGRVVYREVVVGSGEETIAAIQAMNDGSYDLWIVGRKQGINPNIISGLRGWSETQELGPIGDYISFVDFSGSALVIHQQITRG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00380 796 PANTHER CATION/H + ANTIPORTER 38 795 - -
Bva12g00380 796 Gene3D - 60 461 IPR038770 -
Bva12g00380 796 Pfam Sodium/hydrogen exchanger family 68 453 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva12g00380 796 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 38 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00380 Bva-Chr12 5790209 5793588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00380 36 793 Antiporter Super Family AT5G58460 44.584 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00380 - - zju:107411526 866.685