Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00373 atggcaccCACCACGTATTTCATCGCTTTGGTTTTCAACTCAACCCTCGTTCTAATCAACACAAACAAAGCCAAGAAACCAAAGTTCCCTTCAATTCTCATATTTGGAGATTCAACTGTGGATACAGGCAACAACAATTTCATTGACGAAGCTATTTTTCTAAAGGCAAACCACTATCCTTATGGCAAAGATTTTCCTGGCCATGTTGCCAATGGAAGGTTTTctaatgcaaaattaataccTGACATGCTAGCCTCTATGTTAGACATCAAAGAAACTGTGCCTCCTTTTTTGAACTCTAACCTCTCGGATCATCAACTCCTAACCGGTGTTAACTTCGCGTCATCGGGCGCGGGATTTGATGACTTAACCCTGTCTGCACTCCATGCAATCCCAGTGCTCAAGCAGACAGAGTACTTTAAAAACTATACTGTGAAGCTGAAGAAAATTGCAGGGAATGAAGAAACTGAGAAGATACTTGAGGGTGCTCTTGTTATAGTCAGTGCAGGGACTAATGACTTTACCCTAAATTTCTATATCTTACCCATAAGGGCATTGGAGTACAAGTTCAACATCAGTGCGTACCAAGATTTTCTGCAGAGCAGGCTTCAAATCTTCATTGAGAAACTGTATGAACTTGGTTTGCGAAAAATAGCTGTAGCTGGGCTTCCTCCTGTGGGATGCTTACCCTTGCAAATGACTTTGAAGTTTGAGAACCCAAAGCATAGAGAATGCGTAGAGAGTCAGAACTCAGACTGCCAATTATATAACCAGAAACTTGCAAAGCTGTTACCTCAGATAGAAGCAAAGCTTTCTGGCAGCAAAGTTGTTTATACAAACATCTATGACCCTTTACTGGATATGATAAATCACCCTCAAAAATATGGTTTTGAGATAAGTGAGAAAGGCTGTTGTGGTAGGGGACTTTTGGCAGCGGGTCCACTGTGTAATGTCTTGACACCAACTTGTGATGATGCTTCAAAGTACATGTTTTGGGATTCTATTCATCCCACTGAAGCTGCTTATCAATACATTGCTGAGTACGTGGAAGAACATGTCCTACCAAAGTTGTACGAAATTGAACCACAGCAGTTGCTTTCATTCAAGCAGATAAATCccaaaattaattgtgttta 1136 0.3952 MAPTTYFIALVFNSTLVLINTNKAKKPKFPSILIFGDSTVDTGNNNFIDEAIFLKANHYPYGKDFPGHVANGRFSNAKLIPDMLASMLDIKETVPPFLNSNLSDHQLLTGVNFASSGAGFDDLTLSALHAIPVLKQTEYFKNYTVKLKKIAGNEETEKILEGALVIVSAGTNDFTLNFYILPIRALEYKFNISAYQDFLQSRLQIFIEKLYELGLRKIAVAGLPPVGCLPLQMTLKFENPKHRECVESQNSDCQLYNQKLAKLLPQIEAKLSGSKVVYTNIYDPLLDMINHPQKYGFEISEKGCCGRGLLAAGPLCNVLTPTCDDASKYMFWDSIHPTEAAYQYIAEYVEEHVLPKLYEIEPQQLLSFKQINPKINCV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00373 378 CDD SGNH_plant_lipase_like 30 349 IPR035669 -
Bva12g00373 378 Gene3D SGNH hydrolase 19 354 IPR036514 -
Bva12g00373 378 SUPERFAMILY SGNH hydrolase 30 361 - -
Bva12g00373 378 Pfam GDSL-like Lipase/Acylhydrolase 32 349 IPR001087 GO:0016788
Bva12g00373 378 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 23 348 - -
Bva12g00373 378 PANTHER GDSL ESTERASE/LIPASE EXL3 23 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00373 Bva-Chr12 5744679 5746218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00373 29 353 Pollen Coat Proteome AT1G75910 35.780 4.10e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00373 - - gmx:100817270 451.055