Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00367 ATGGCAAATACACTAAGGAGTTCCAGAGGTCTTGTTGGCGATACGCTGCTAATATGTGAATATGCTGAGGAAACAACTCATGGAAGCATTTTATCTGGAGATGATCCTCTCACCTGCGTAACAGCTGCTTTgctgtttcaaatttttataattttctccgTCACTAGAATCACTCATTTCCTATTAAGCCCTCTCCGTCAAACCACAATCATTTCACACATTGTGgcTGGTATCATTATGGGTCCCTCAGTTCTAGGTCAACAGAAGGTGTACTATGAAAGGTTATTCCCAGATTCAAGCAAATTGGCCTTGACAGTCTTTGGAGAATTTGGAATCATGATTCACTTCTTCAAGATAGGAGTTCAGGTTGacccaaaacaaataatgagTATAAGAAGAAAGGAACAGCTAATTGGTTTTACAGGTTACATACTTGCTTTGGCATTTGGCATTGTGGCCTACAACATTTTTCATGATTATTTCGCCAATTTCCAGAATAAAGAACTGCAAACTGGAATGGCATCAATGGTAGTCCTGAATTCTCTGACTTCATGTGTTGTGATTGGCAGCTTTCTCAGTGAACTCAACATGCTAAATTCTGATATTGGACGATTGGCTTTGTCCACTTCCATGATAAGTGATGCAAGTGCATGGGTGTTAGCATTTATCATTGTTAACTTTGGTAGAGCTGTGGAATTCTCTTCATATAAACCTGTGATGGAAGTTCTATCATTAATGTGCTACTACGGTTCGATGTTCTTGTTGTTTAGGCCGTTAGTTATAAAGATAGCGAATCGAACTCCAGAAGGAAAACCCATGGCAGAAAGCCATTTTGTGTCAATAATTTGTATACTTCTGTTTTTGGCAGTTTTGGGGCAATACATAGGCCAGACACCATCATTTTCAGCTTTCATCTTTGGGTTGTCCTTGCCGGCTGGACCACCGTTAGGGGCGGTTCTAGGGCAGAGAATTGATTGTATTAGTTCTGCTGTCCTTGTTCCAATTTACTGCACAATAAGTGGGTTCAAGTCAAATCTTATTTCTACAATACACACACCAGAATCAGCAAGTATGGAGGCTATTATTCTTGCAGGCTACTTGGGCAAGTTCACAGGCATTCTGTTGCCATCTCTCTACTATGAGCTAAGTTACTTGGATGCTTTTGCTTTGGCTCTCATCATGTGTTGCAAAGGCATTGTAGACCTCTCCATGCTCAATATTCTAAGTGATTCCAAGATCGTAAACAACCAAATGTACACCCTTGCGGTATTCACAACCGTGGTTATGACTGGACTTATTACTCCAACTGTGGCTTACATCTATGATCCTTCAAGGAGATATGAAGCCAAGTTTAGAAGAACAATTTTGAACTCTGAGGAAAATCTTGATCTACGAATTCTAGTTTGTATCCACAAGGAAGATGATGTGCAGTCAACGATCAGTCTTCTCGAAGCCTCAAACCCAGAAAGGACTGCACCATTCTGCGCCATTGTGCTCCAATTAATGGAGCTCTCTGGAAGAGCAACCGCGATTCTTGCGCCAAACCAAGATTTTAGAAGCAAATCATCCAGGGGAATTTGCTCAGAACACATAGTCAATGCCTTCAATCAATTCGAGCACCACAATAGAGGGTGTGTCATGGTGGAACATTTCACTGCAGTTGCACCATACATGAGCATCCACGACGACGTTTGCTCGGTTGCCTTGGACAAGAAGGCAAGCATTATAATTCTTCCATTCCACAAGAAATGGGCCATTGATGGAGAAATtgaagcttcttcttcttcaattagGATACTAAACCAAAATGTTCTAAAGAAAGCACCTTGTTCTGTTGGAATTCTAATTGATAGAAGTTTGATCAAAGGGAAAAATTCAGTTTTCTCAACTGGGTCAATCTATAACATTGCAGTGCTCTTTCTAGGTGGTGTTGATGACCAAGAGGCACTGGCTTATAGCATGCGCATGGCTGGAAGCCCTAATGTTAATCTTACCATTTTTCGGTTAATATCGGAGAGGAACAACAATCAAAGGAATCATGAAGAAGAAGACAGTAGTTTTATGGAAGATATATTGCCTAGAACAATGCCTGTGGATAAAGTTATTTACGAGGAGGAGAGAGTGAAAGATGGTGCAGGAACGATTCAGGTTATTAAGAAGATAGAAGGgaattttgatttggttttagTAGGTAGATCACATAAGAAAGATAATCCATTTACTCTTGGCTTTACTGAATGGAGTGAGTGCCCAGAGCTTGGGCTAATAGGGGATATGCTAGCTTCTcctgattttaaattttcagttttGGTGGTACAGCAGCAAATGAATAGTTA 2336 0.3896 MANTLRSSRGLVGDTLLICEYAEETTHGSILSGDDPLTCVTAALLFQIFIIFSVTRITHFLLSPLRQTTIISHIVAGIIMGPSVLGQQKVYYERLFPDSSKLALTVFGEFGIMIHFFKIGVQVDPKQIMSIRRKEQLIGFTGYILALAFGIVAYNIFHDYFANFQNKELQTGMASMVVLNSLTSCVVIGSFLSELNMLNSDIGRLALSTSMISDASAWVLAFIIVNFGRAVEFSSYKPVMEVLSLMCYYGSMFLLFRPLVIKIANRTPEGKPMAESHFVSIICILLFLAVLGQYIGQTPSFSAFIFGLSLPAGPPLGAVLGQRIDCISSAVLVPIYCTISGFKSNLISTIHTPESASMEAIILAGYLGKFTGILLPSLYYELSYLDAFALALIMCCKGIVDLSMLNILSDSKIVNNQMYTLAVFTTVVMTGLITPTVAYIYDPSRRYEAKFRRTILNSEENLDLRILVCIHKEDDVQSTISLLEASNPERTAPFCAIVLQLMELSGRATAILAPNQDFRSKSSRGICSEHIVNAFNQFEHHNRGCVMVEHFTAVAPYMSIHDDVCSVALDKKASIIILPFHKKWAIDGEIEASSSSIRILNQNVLKKAPCSVGILIDRSLIKGKNSVFSTGSIYNIAVLFLGGVDDQEALAYSMRMAGSPNVNLTIFRLISERNNNQRNHEEEDSSFMEDILPRTMPVDKVIYEEERVKDGAGTIQVIKKIEGNFDLVLVGRSHKKDNPFTLGFTEWSECPELGLIGDMLASPDFKFSVLVVQQQMNS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00367 778 Gene3D - 40 449 IPR038770 -
Bva12g00367 778 Pfam Sodium/hydrogen exchanger family 49 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva12g00367 778 PANTHER CATION/H(+) ANTIPORTER 14 30 775 - -
Bva12g00367 778 PANTHER CATION/H + ANTIPORTER 30 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00367 Bva-Chr12 5694109 5697875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00367 17 775 Antiporter Super Family AT1G06970 38.492 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00367 - - gmx:100804488 759.214