Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00354 ATGCCAACATCTTCAAGCACTGCTCTTCAATGGCTAAGCCTTGTGGCCATCATATGGCTCCAAGCCATAAATGGCACAAACACCAACTTCCCAGCTTACTCCTCTGAACTTAAGCAGTTTCTTTCAATCTCCCAAGTTCAGCTCAACAACCTTGCTTTTGCTTCTGATGCAGGAAAGCTCTTTGGCTGGTTTTCTGGCATGGCTTCTCTTTATCTCCCTCTTTGGCTTGTCCTCTTGATTGGTTCAATTCTTGGGTTAATTGGTTATGGAGTCCAATATCTCTTCATCACAGACAAAATCTCCTCTCTTTCCTACTGCCATGTTTTCTTGCTCACCGTTGTGGCAGGAAACGGTATTTGCTGGTTTAACACGGTTTGCTATGTTGTCGCAATAAGAAACTTCCCGTGTAATCGCCAAGTCGCCGTGGGGATAACAAATAGTTATCAAGGATTAAGTGCCAAGATTTACACAAACATTGTTGAAGCTGTTTCCCCACAGCATAAAGCTAGAACCTTTCTTCTGCTAAATGCTGTTTTACCAGCCATTGTGACCATAATAACTGCCCCTTTTGCCAGAGAAATTGAAAACACGGGGTCTAAGCAAATGGGTATTGGATTTATTGTAATGTTTGCGGTTACAATTGGAACTGGGATTTATGCTGTGGCCACCAGCTTGCAATCTGTGTCAAGAAAAATGTCAGCACTTAGTATTTTAATTGGTATTCTTGTGTCCCTTTTATTGCCTCTAATAATCCCAGTTTCAATGAAGTTCAAAGAACTAGCAGATGCatggaaaatgaagagagaaaggCTAAGAGTTTATCATTCAACTGTGGAACAGAACAGTGTTGCAGCAGAAGAGAGAATGGAGAATGATGAggagaaagaaggagaagaagaagaagaaagtagaGAAGTTCAAGAAAGTGATGTCAGCAGAGAAGAAATAGGTTGGAATTTAATGCTAAGAAGAATAGATTTCTGGTTATATTACTTTGTGTATCTTTTTGGTGCAACTATAGGGATGGTTTTTCTGAATAATTTGGGGCAAATAGCTGAGTCTCGTGGGTTCTCTAGTACCAAttctttggtttctttgtCTTCATCTTTTGGCTTCTTTGGGAGACTCATGCCATCGTTAGTGGACTACTTCTAcaggta 1160 0.381 MPTSSSTALQWLSLVAIIWLQAINGTNTNFPAYSSELKQFLSISQVQLNNLAFASDAGKLFGWFSGMASLYLPLWLVLLIGSILGLIGYGVQYLFITDKISSLSYCHVFLLTVVAGNGICWFNTVCYVVAIRNFPCNRQVAVGITNSYQGLSAKIYTNIVEAVSPQHKARTFLLLNAVLPAIVTIITAPFAREIENTGSKQMGIGFIVMFAVTIGTGIYAVATSLQSVSRKMSALSILIGILVSLLLPLIIPVSMKFKELADAWKMKRERLRVYHSTVEQNSVAAEERMENDEEKEGEEEEESREVQESDVSREEIGWNLMLRRIDFWLYYFVYLFGATIGMVFLNNLGQIAESRGFSSTNSLVSLSSSFGFFGRLMPSLVDYFYR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00354 386 Pfam Nodulin-like 10 253 IPR010658 -
Bva12g00354 386 Coils Coil 275 302 - -
Bva12g00354 386 SUPERFAMILY MFS general substrate transporter 9 195 IPR036259 -
Bva12g00354 386 SUPERFAMILY MFS general substrate transporter 201 375 IPR036259 -
Bva12g00354 386 MobiDBLite consensus disorder prediction 291 305 - -
Bva12g00354 386 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 385 - -
Bva12g00354 386 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 385 - -
Bva12g00354 386 MobiDBLite consensus disorder prediction 282 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00354 Bva-Chr12 5597241 5598401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00354 5 385 Nodulin-like Gene Family AT2G30300 49.485 3.59e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00354 - - gmx:100793610 457.988