Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00345 ATGCCAACATCTTCAAGCACTGCTCTTCAATGGCTAAGCCTTGTGGCCATCATATGGCTCCAAGCCATAAATGGCACAAACACCAACTTCCCAGCTTACTCCTCTGAACTTAAGCAGTTTCTTTCAATCTCCCAAGTTCAGCTCAACAACCTTGCTTTTGCTTCTGATGCAGGAAAGCTCTTTGGCTGGTTTTCTGGCATGGCTTCTCTTTATCTCCCTCTTTGGCTTGTCCTCTTGATTGGTTCAATTCTTGGGTTAATTGGTTATGGAGTCCAATATCTCTTCATCACAGACAAAATCTCCTCTCTTTCCTATTGCCATGTTTTCTTGCTCACCGTTGTGGCAGGAAACGGTATTTGCTGGTTTAACACGGTTTGCTATGTTGTCGCAATAAGAAACTTCCCGTGTAATCGCCAAGTCGCCGTGGGGATAACAAATAGTTATCAAGGATTAAGTGCCAAGATTTACACAAACATTGTTGAAGCTGTTTCCCCACAGCATAAAGCTAGAACCTTTCTTCTGCTAAATGCTGTTTTACCAGCCATTGTGACAATAATAACTGCCCCTTTTGCCAGAGAAATTGAAAACACGGGGTCTAAGCAAATGGGTATTGGATTTATTGTAATGTTTGTGGTTACAATTGGAACTGGGATTTATGCTGTGGCCACCAGCTTGCAATCTGTGTCAAGAAAAATGTCAGCACTTGGTATTTTAATTGGTATTCTTGTGTCCCTTTTATTGCCTCTAATAATCCCAGTTTCAATGAAGATCAAAGAACTAGCAGATGCatggaaaatgaagagagaaaggCTAAGAGTTCATCATTCAACTGTGGAACAGAACAGTGTTGCAGCGGAAGAGAGAATAGAGAATGATGAggagaaagaaggagaagaagaagaagaaagtagaGAAGTTCAAGAAAGTGATGTCAGCAGAGAAGAAATAGGTTGGAATTTAATGCTAAGAAGAATAGATTTCTGGTTATATTACTTTGTGTATCTTTTTGGTGCAACTATAGGGATGGTTTTTCTGAATAACTTGGGGCAAATAGCTGAGTCTCGTGGGTTCTCTAGTACCAAttctttggtttctttgtCTTCATCTTTTGGCTTCTTTGGGAGACTCATGCCATCGTTAGTGGACTACTTCTAcagGGGTAAGCACACAATTTCAAGACCAGCTTCCATTATGGTTTTGATGGCTCCAACACCAGCGGCATTCTTCTTGCTTCTCCACAAAAGCAACCTTGCTCTCTATGCCAGCACTGCCATAATAGGAGTGTGCAGTGGAGCAATCACTTCCATTGCTGTGTCCACAACCACTGAGCTATTTGGGGCAAAGGGTTTCTCTGTGAACCATAATTTGGTGGTGTCCAACATTTCCTTAGGCTCCTTTCTCTTTGGCTACTTTGCTGGAGTTCTCTACAGAAAAGAGGGCCATGTTGCAGATGGCAAGTGCATGGGCATGGAATGCTACAGACACACTTTCATCATCTGGGGTTCTCTTTGTTTCTTCGGGACTTTCTTGGCTTTCATTCTACATATGAGGACTCGAAAGTTTTACTCGCATAGATA 1577 0.402 MPTSSSTALQWLSLVAIIWLQAINGTNTNFPAYSSELKQFLSISQVQLNNLAFASDAGKLFGWFSGMASLYLPLWLVLLIGSILGLIGYGVQYLFITDKISSLSYCHVFLLTVVAGNGICWFNTVCYVVAIRNFPCNRQVAVGITNSYQGLSAKIYTNIVEAVSPQHKARTFLLLNAVLPAIVTIITAPFAREIENTGSKQMGIGFIVMFVVTIGTGIYAVATSLQSVSRKMSALGILIGILVSLLLPLIIPVSMKIKELADAWKMKRERLRVHHSTVEQNSVAAEERIENDEEKEGEEEEESREVQESDVSREEIGWNLMLRRIDFWLYYFVYLFGATIGMVFLNNLGQIAESRGFSSTNSLVSLSSSFGFFGRLMPSLVDYFYRGKHTISRPASIMVLMAPTPAAFFLLLHKSNLALYASTAIIGVCSGAITSIAVSTTTELFGAKGFSVNHNLVVSNISLGSFLFGYFAGVLYRKEGHVADGKCMGMECYRHTFIIWGSLCFFGTFLAFILHMRTRKFYSHR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00345 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 524 - -
Bva12g00345 525 SUPERFAMILY MFS general substrate transporter 9 195 IPR036259 -
Bva12g00345 525 MobiDBLite consensus disorder prediction 275 308 - -
Bva12g00345 525 SUPERFAMILY MFS general substrate transporter 202 520 IPR036259 -
Bva12g00345 525 MobiDBLite consensus disorder prediction 291 305 - -
Bva12g00345 525 Pfam Nodulin-like 10 253 IPR010658 -
Bva12g00345 525 Gene3D MFS general substrate transporter like domains 197 519 IPR036259 -
Bva12g00345 525 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 524 - -
Bva12g00345 525 Coils Coil 275 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00345 Bva-Chr12 5538518 5541178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00345 5 525 Nodulin-like Gene Family AT2G30300 49.060 3.36e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00345 - - gmx:100808034 677.167